PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc01253.1.g00030.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 285aa MW: 31871.2 Da PI: 7.9729

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc01253.1.g00030.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.7	3e-46	10	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgy 82 pGfrFhPt+eel+ +yLk+ v+gkkl++ ++i++v++y+++Pw+Lp + +e+ewyfF++rd+k a+ g r++r+t++g+ Zpz_sc01253.1.g00030.1.sm.mk 10 PGFRFHPTEEELLEFYLKQVVQGKKLKF-DIIPTVHLYRHDPWELPGLSRIGEREWYFFVPRDRKLASgGGRPSRTTERGF 89 9************************9.99***********7777899********997588****** PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg+d++v ++ ++l+glkktLv+y+grap+g++tdWvm+eyrl Zpz_sc01253.1.g00030.1.sm.mk 90 WKATGSDRAVRCAadPKRLIGLKKTLVYYEGRAPRGTRTDWVMNEYRL 137 *******98777788*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	53.895	8	165	IPR003441	NAC domain
SuperFamily	SSF101941	1.02E-53	9	165	IPR003441	NAC domain
Pfam	PF02365	2.1E-24	10	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence Send to blast
MSGAAELELP GFRFHPTEEE LLEFYLKQVV QGKKLKFDII PTVHLYRHDP WELPGLSRIG 60 EREWYFFVPR DRKLASGGGR PSRTTERGFW KATGSDRAVR CAADPKRLIG LKKTLVYYEG 120 RAPRGTRTDW VMNEYRLPDS IAGAGEGDSS PPPKEDIVLC KIYRKAVSLK ELEQRVAMEE 180 LARATATPSA SHSTGSSADS ISSSEPHPHS CQVTTTTEMK KEETDACAVV KPATLSLPRL 240 EVGKPSQQQI GGLGAAEWMQ DPFLTQLRSP WMEAWSPYYA SVLNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-45	5	165	11	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc01253.1.g00030.1.sm.mk

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002439057.1	1e-149	NAC domain-containing protein 67
Refseq	XP_004966508.1	1e-149	NAC domain-containing protein 67
Swissprot	Q10S65	1e-103	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A194YLW2	1e-148	A0A194YLW2_SORBI; Uncharacterized protein
TrEMBL	K3XYI6	1e-148	K3XYI6_SETIT; Uncharacterized protein
STRING	Si006994m	1e-148	(Setaria italica)
STRING	Sb10g030770.1	1e-148	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	4e-80	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]