PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01237.1.g00170.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Nin-like | ||||||||
Protein Properties | Length: 100aa MW: 11580.3 Da PI: 8.8164 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 55.4 | 1.2e-17 | 25 | 65 | 9 | 49 |
RWP-RK 9 dlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 +++ F+l i+d A e g+c++ LKriCR++G++RWP Rk+ Zpz_sc01237.1.g00170.1.am.mk 25 EIRTRFHLRIEDTAAEPGICQSSLKRICRNHGVPRWPGRKV 65 7999************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 13.321 | 4 | 88 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.7E-15 | 25 | 65 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence Send to blast |
MDLSSWSFLK LGTTQELEGL FMWPEIRTRF HLRIEDTAAE PGICQSSLKR ICRNHGVPRW 60 PGRKVWFRLE QLSKLAMEAM ARQGEAPGEE GGHRRQEMIA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01237.1.g00170.1.am.mk |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP47125 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 3e-10 | Nin-like family protein |