PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc01218.1.g00280.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 455aa MW: 50900.1 Da PI: 8.3145

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc01218.1.g00280.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34	6.4e-11	82	124	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+ rr+++NReAAr+sR+RKka+i++Le+ +L++ + L+ Zpz_sc01218.1.g00280.1.sm.mkhc 82 EKAMRRLAQNREAARKSRLRKKAYIQQLETSRIKLSQLQQNLQ 124 5889*************************98888888776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.3E-8	75	127	No hit	No description
SMART	SM00338	5.0E-8	79	143	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.082	81	125	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.7E-8	83	124	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.05E-7	84	129	No hit	No description
PROSITE pattern	PS00036	0	86	101	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	9.5E-24	169	243	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MTSASPQFAA PIRMGMYERP APTAPIGMWS NEPFKVDSGG QATSASTIME ADNKFDAPLE 60 DVPQVSLEPA RSTDQETSKP PEKAMRRLAQ NREAARKSRL RKKAYIQQLE TSRIKLSQLQ 120 QNLQQARQQG VYANGNLGDS NLGFSGSVDP GVAAFEIEYS HWVDEQNRHT AELRNALLVQ 180 TTSDLEMRML VETGLKNYEH LFCIKTIAAN SDVFYIMSGV WRTPVERFFI WIGGFRPSEV 240 LKVPGCPCYR ILTPQLEPLT ERQRAFVCGL QQTSTQAEDA LLQGMEKLQQ NVTETLAGVE 300 PFASSEVYVL QMASAVDKLK ELVGFVNQAD HLRRTTLQEM HKILTTRQAA KGLLVLGDYF 360 QRLRALSQLW AASPRESAIS AVNIRLAGVT QFTDEKPELA MPVHAFLPRT MDQATPIGQP 420 PSMHGRVQRV DAQFQGVIAQ VEPRPTSRPG FMRWH

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MTSASPQFAA PIRMGMYERP APTAPIGMWS NEPFKVDSGG QATSASTIME ADNKFDAPLE  60
DVPQVSLEPA RSTDQETSKP PEKAMRRLAQ NREAARKSRL RKKAYIQQLE TSRIKLSQLQ  120
QNLQQARQQG VYANGNLGDS NLGFSGSVDP GVAAFEIEYS HWVDEQNRHT AELRNALLVQ  180
TTSDLEMRML VETGLKNYEH LFCIKTIAAN SDVFYIMSGV WRTPVERFFI WIGGFRPSEV  240
LKVPGCPCYR ILTPQLEPLT ERQRAFVCGL QQTSTQAEDA LLQGMEKLQQ NVTETLAGVE  300
PFASSEVYVL QMASAVDKLK ELVGFVNQAD HLRRTTLQEM HKILTTRQAA KGLLVLGDYF  360
QRLRALSQLW AASPRESAIS AVNIRLAGVT QFTDEKPELA MPVHAFLPRT MDQATPIGQP  420
PSMHGRVQRV DAQFQGVIAQ VEPRPTSRPG FMRWH

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc01218.1.g00280.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025823704.1	0.0	transcription factor TGAL6-like isoform X2
Refseq	XP_025823705.1	0.0	transcription factor TGAL6-like isoform X2
Swissprot	A0A0P0WFC8	0.0	TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBL	A0A0A9D9I6	0.0	A0A0A9D9I6_ARUDO; Uncharacterized protein
STRING	Pavir.Gb00388.1.p	0.0	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10030.2	1e-121	TGACG motif-binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Okada A, et al. OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice. J. Biol. Chem., 2009. 284(39): p. 26510-8 [PMID:19635799] Okada K The biosynthesis of isoprenoids and the mechanisms regulating it in plants. Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25 [PMID:21737944] Yamane H Biosynthesis of phytoalexins and regulatory mechanisms of it in rice. Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8 [PMID:23748776] Miyamoto K, et al. Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells. PLoS ONE, 2014. 9(8): p. e105823 [PMID:25157897] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]