PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01188.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family BES1
Protein Properties Length: 632aa    MW: 66986.8 Da    PI: 10.0506
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01188.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822149.52.6e-46168239172
                        DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkg 72 
                                   ggs r p+w+ErEnn++RERrRRaiaaki++GLRa+Gny+lp ++DnneVl+ALc+eAGw+ve+DGttyrk 
  Zpz_sc01188.1.g00030.1.am.mk 168 GGSVRVPSWRERENNRLRERRRRAIAAKIFTGLRAHGNYQLPRHCDNNEVLRALCNEAGWTVEPDGTTYRKV 239
                                   6899******************************************************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.8E-43170240IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 632 aa     Download sequence    Send to blast
MVAAQLLKRS SPSFARRDWP PPSQSCTASA LLCRRQVAWH GRWRPKPHKL NSRHMTGLPF  60
IQAPSSIFVY MSGYSHAETP ERRQTGGQIS IIHSLDGHSR FRWRAAYLTA LGGASESLTR  120
HSSTTTAHQR EPALVGEERR EEERRTMNGG GEGAAAGAGA GGNRTGGGGS VRVPSWRERE  180
NNRLRERRRR AIAAKIFTGL RAHGNYQLPR HCDNNEVLRA LCNEAGWTVE PDGTTYRKVR  240
TLPRLSPVLL LHLRPPGVLW LLRIWRALNA ADSCRASPSS LTATYGIRGS VSQNFTTARS  300
ERFLVEFFAM NPPLSGRAPC RQGPSPPRAA VHAWGTARCA LRKHEHHVGD CYGGDEATVL  360
CPGAVEHSGR GCKPPAAGDH TGIFRSGTAS PCPTYPLSPL ASLNPSPTSS SSRITFGCGS  420
SSNNFFFAGG GGSATDGGSF FPWLKAVSGA GGFSSYPSYG AASFSAPVTP PAGSSAAPPR  480
WAAGASSSSR YASQSYTTPH SPTAGRWALA DPATWLPGFQ FPASSAGGKS PVYGHAPPFG  540
AGAGASSSRL GLPGLNSNSC PRSPAAPYGG AVACRLGDDA KTAEEDAAAD CSLSLEGSQA  600
MVRAWEGEVV KECNEEELEL TLGSSRTRAD RA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-19172238372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-19172238372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-19172238372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-19172238372438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01188.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0036828e-70AP003682.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0427B07.
GenBankAP0036868e-70AP003686.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0659D09.
GenBankAP0149628e-70AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
GenBankCP0126148e-70CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4538633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.34e-23BES1 family protein