PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01013.1.g00180.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 952aa    MW: 103078 Da    PI: 10.6965
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01013.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.5e-18685735155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + y+GVr+++ +g Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Zpz_sc01013.1.g00180.1.am.mk 685 PSYRGVRRRS-WGVWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 735
                                   57*****887.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF040493.9E-3162212IPR007192Cdc23
PfamPF008473.2E-12685735IPR001471AP2/ERF domain
CDDcd000188.07E-28685745No hitNo description
SuperFamilySSF541711.11E-19686744IPR016177DNA-binding domain
SMARTSM003803.1E-36686749IPR001471AP2/ERF domain
PROSITE profilePS5103223.512686743IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.0E-31686744IPR001471AP2/ERF domain
PRINTSPR003675.5E-9687698IPR001471AP2/ERF domain
PRINTSPR003675.5E-9709725IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0030071Biological Processregulation of mitotic metaphase/anaphase transition
GO:0005680Cellular Componentanaphase-promoting complex
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 952 aa     Download sequence    Send to blast
MCFPLRPNLI LRSIGLHPHH QARSERGRKN SKSLRSPVRR SVPTKPPPVS PAGPMAYAKE  60
TYRAELRSAA RQLGERCLYS AAKWAAELLV GVEPDSAPAP STAMDSPSSS NAASGGRLLH  120
LHRSGGSSFR HRPRPGGGAS SSEVGTPLGG VSYVHTPIPD DDAFDTGGDK YLLAKTYFDC  180
REYRRAAHVL QNQGGRKVVF LRCYALYMSS WKTNPCPRED ELSGERPVGR GRQTVDKAPR  240
PLGTGFFTQP TAHISGQSVR PDPTQPDRAG RLTAQQSSPH TTRRVTSPCT PSTPRDLAPH  300
PRSRRPLPHG CHPRRRPSTP RDPAPRLHSH RPLPHGRHPP TPSHALTGSI PSGEEPATRR  360
TGLPDDEAPP RPLPSPRQPS LPSPWPPPAT PLPRPDRIHS LRRGTSHQEN RAPRRRGPCS  420
GNNEPHRLGG YDVNPPRPAT PTAPATTTST PHPRRAVLRW DDAVAPPGRS RTRHHQLTYL  480
WDAISNKKNI TGPGGCAPGT LTPAPCQSLE KILSPKPGKK VGHGAGSVYP ERCQHGRGDE  540
AQGHRKHMMK TIEEEEVSRV VVAPMARSTS ARYLYQPGSA PLSARYLPIR VLAACLIATR  600
AMESDAIHAP ATTSSSSDSG SCVINGAQEL SKNGKPSTKH LKRKRATCLP ADPTGTGARV  660
PEAVDDERYG EDGSSRAKGS AGRHPSYRGV RRRSWGVWVS EIREPRKKSR IWLGTFPTAE  720
MAARAHDVAA LAIKGRAAHL NFPHLAHELP RPASTSPADI QAAAAAAAAA ATDQFGSSPA  780
AEAASSSSAA CWEETAAAGH GEENALFDLP DLLLDLQNGL WSPPLWAAAE EYDTGDVASL  840
QEPLLWVYDQ CYRTSAVPFG RAGRVTGQPV VDRTTNTGIP RDRFVWTNMT GHARGVAVVS  900
GWEVTSRCGE VKQAVLWLYG FKSRNEHLTP WRHVRAHNRP AGRRSPGPPV AV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-18677744573Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01013.1.g00180.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-28ERF family protein