PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01013.1.g00090.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 740aa    MW: 78836.5 Da    PI: 9.7434
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01013.1.g00090.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.4e-20578629256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   +y+GVr+++ +g+++AeIrdp+++g   r++lg+++ta eAa+a+++a+ +++g+
  Zpz_sc01013.1.g00090.1.am.mk 578 KYRGVRQRP-WGKYAAEIRDPKKRG--SRVWLGTYDTAVEAARAYDRAAFRMRGA 629
                                   8********.***********8876..**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.3E-32577637IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-22578637IPR016177DNA-binding domain
SMARTSM003804.5E-39578642IPR001471AP2/ERF domain
PfamPF008471.8E-13578628IPR001471AP2/ERF domain
PROSITE profilePS5103224.223578636IPR001471AP2/ERF domain
CDDcd000182.46E-29578637No hitNo description
PRINTSPR003677.0E-13579590IPR001471AP2/ERF domain
PRINTSPR003677.0E-13618638IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 740 aa     Download sequence    Send to blast
MGNKVFCSCC PPSPSNSGYL AAGMDRWTGV VHVPLSRGGP LSRVAASLIL SPTKTLAVRL  60
PPSALLAFGF FPFVPRANAI LFTGDRVRGT GDPTIERLSD AVHLAGVLAG KLSGETNAWV  120
IDAARFSGSF AVYRELVPSV DAAGDPKGYE PSGFPAAAGV ASLLAHGIGE AFQLVLLRLA  180
TKLDWGLARR TESNPRNTVG FRPRARPALV WLDSRAVLTR FSTALASIFS GARGPSARRW  240
PLLGKKGVAR CGESSPATLP RALSCGNWEP RNEKNAYALR RVDQQPVRGQ SFAAAGVTVA  300
SAVLVETMPE IRVTYVLCIQ GPHAREPIDR ALPAASKRCT VSINRRLPAT SAVEKVLEDD  360
GRGVGSGGVT EKLRRCSRLL HAVFVRVEAQ PTTTAKDQMN TVTRVNEPSI SARDRSPSVA  420
RQLTAGAAVR GGAGPPRDMD FSGEGDDFWL QIIREQCYAG EACLPVPETY AASSAVAPPA  480
QQAYQHTAFT LQQQQQQQVA LVDLTHGYAD AAAAAAAFQA AEPAAPLMIR FGGEPSPRPS  540
LTISLPPTSL AWGTDVVAPL PAHSAAGAAV ADVDDFRKYR GVRQRPWGKY AAEIRDPKKR  600
GSRVWLGTYD TAVEAARAYD RAAFRMRGAK AILNFPNEVG SLGADFLATP PQHAARSPNK  660
RKLRDDAQTD TETLTSPASS QTTSLSPATT AASTAAGAHE EWLPMTPSSW AWEQFESMFE  720
SLPPLSPHPG QMGFSEVIVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-26577641468ATERF1
3gcc_A4e-26577641468ATERF1
5wx9_A9e-265786381474Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00556DAPTransfer from AT5G51190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01013.1.g00090.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.17e-22ERF family protein