PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01010.1.g00110.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB
Protein Properties Length: 690aa    MW: 75977.4 Da    PI: 8.6621
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01010.1.g00110.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.65.1e-17392439148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                   +g+WT+eEd +lv +v+++G+g+W++++   g+ R+ k+c++rw +yl
  Zpz_sc01010.1.g00110.1.am.mk 392 KGPWTPEEDIILVSYVQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYL 439
                                   79********************************************97 PP

2Myb_DNA-binding43.11e-13445490148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                   rg++T+ E+ ++v++  +lG++ W++Ia+++   Rt++++k++w+++l
  Zpz_sc01010.1.g00110.1.am.mk 445 RGNFTPHEEGIIVHLQSLLGNR-WAAIASYLS-QRTDNDIKNYWNTHL 490
                                   89********************.*********.************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF015549.3E-28134294IPR002528Multi antimicrobial extrusion protein
Gene3DG3DSA:1.10.10.604.1E-22383442IPR009057Homeodomain-like
PROSITE profilePS5129425.672387443IPR017930Myb domain
SuperFamilySSF466892.04E-29389486IPR009057Homeodomain-like
SMARTSM007172.5E-13391441IPR001005SANT/Myb domain
PfamPF002498.9E-16392439IPR001005SANT/Myb domain
CDDcd001673.02E-11394439No hitNo description
Gene3DG3DSA:1.10.10.601.6E-22443495IPR009057Homeodomain-like
PROSITE profilePS5129417.77444494IPR017930Myb domain
SMARTSM007176.6E-12444492IPR001005SANT/Myb domain
PfamPF002492.1E-11445490IPR001005SANT/Myb domain
CDDcd001672.19E-7447488No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006855Biological Processdrug transmembrane transport
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0015238Molecular Functiondrug transmembrane transporter activity
GO:0015297Molecular Functionantiporter activity
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    Send to blast
MLNGPAAVAD ATDNKQPPSI IVIQSAAAEK SMIGWLLSSS WQMRFFLPDG GGLSCTLDWR  60
KRNQRRARPR GHGMQTTSYL FLFNVTFSSP SSQHMYVVNP HFSPLNILCH HRSPAASGRR  120
AWEENKTLWV VAGPSIFTRF SSFGVTVISQ AFVGHIGATE LAAYALVSTV LMRFSNGILL  180
GMASALETLC GQSYGAKQYH MLGIYLKCSW IILFACSVIL LPVYIFTEPL LVALGQDPAI  240
FAVAGTISLW YIPVMFSYVW SFTLQMYLQA QSKNIIITYL AMLNLGLHLV LSWLMTVKFQ  300
LGLAGLAFVF FGGCPLTWTG FSYAALTDLS AIIKLSLSSG VMLWRQQGPE ISSILTTIDV  360
DNRQQLAQPS CGRPSPEKMG RPPCSDNVGI KKGPWTPEED IILVSYVQEH GPGNWRSVPI  420
NTGLMRCSKS CRLRWTNYLR PGIRRGNFTP HEEGIIVHLQ SLLGNRWAAI ASYLSQRTDN  480
DIKNYWNTHL KKKLKKHQAI GAIFAPPPSG LLSSSTAPAL TSTSHTDHPM MTSPLSKYNY  540
APRTECRNPG DDVTQLIARR SPFAAPAGSL DAESSSYSSY ASSMDNISKL LDSFMKSITP  600
QNDAAHIKPS SNPLLSFEQV SGGGALSNFA DVLPPQPVLM DERSHHEQPK QQQAQAPLSS  660
IEKWLLDEAA EQVGDLIDQF DGCCSVPMLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C1e-2438749422128MYB TRANSFORMING PROTEIN
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01010.1.g00110.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22938296
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-75myb domain protein 60