PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00950.1.g00030.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 1128aa MW: 121329 Da PI: 6.4086

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00950.1.g00030.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.9	6.1e-09	228	306	1	70
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 +Wt e+laL++ + +++ +r+ ++ ++W+ v++++ +r +r + +C+ +we l+ +y +++++e + Zpz_sc00950.1.g00030.1.am.mk 228 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENLaasesfasgLARRGKRAAGECRRRWEALEADYGAVRRWEVR 306 5****************************************9999888889*********************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.62	229	294	IPR017877	Myb-like domain
PROSITE profile	PS50011	24.881	833	1128	IPR000719	Protein kinase domain
Gene3D	G3DSA:3.30.200.20	2.7E-13	836	895	No hit	No description
SuperFamily	SSF56112	2.74E-44	837	1101	IPR011009	Protein kinase-like domain
Pfam	PF07714	6.1E-26	837	1031	IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3D	G3DSA:1.10.510.10	1.7E-23	896	1031	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 1128 aa Download sequence Send to blast
MAGAARCTVR WCDGWAWTPR PATATWPASS TADSRVAASA SQLLRLRTSA AVDRPEWWKQ 60 RARPRAQGPD LAGLHQSASK ATAVSGRRPA ARCSSTRGPT ASLAGSPSRS TTNKISELTH 120 HFISLELTRA SSSLPHRLTP LSRSMDPPTD DDPPCIIQAL RASSSTVPAP PLVQALPALQ 180 SPAKDHAPSS SSSSSRPPKR QPPQQPAAPP PCPRPPSPRR TRSGGAPEWT PAETLALVAE 240 VAAVDDGWSR SVSAFQKWAM VAENLAASES FASGLARRGK RAAGECRRRW EALEADYGAV 300 RRWEVRTGLR YREMSVAARR KAGLPAEFDA EVFGAMDALI RVEEALLANA AGGGGGAGEE 360 VEGLVGGSAV VEVGEEDTGV PEIGEDEVKE DELVDEAQED ESANEIEDED GREDDKEMQP 420 DNGNADTSNS FEEGCEAEAV ETNSKTENSQ NIVWELANKL QENAQHIHTI LNDEANECGN 480 ENHALAYSMS PDAMETTRQK ADELIKSLGG LLGYLNQFTE LIEESGFENK RQQQTQQLGE 540 ALPCLLPPIL RPPASRPLAA CPPRHPLAFP RRCTCRTRSL TTLPRRRVHC CVRPLPPRQR 600 GANFDERPCN DRLVRRDDDS APPARVAMVR PRPHDHLRLA IVLVIAAAAL LTRAAAQNGG 660 RSEADVLIAF RDTLRGADGA PPGPLRSWGT PGPCQGTVSS RFNATMFAGN NFLCGKPLDV 720 ECDESGSPRS GVSALMIAAI VIIILGVLLC VAGIVTGVLG SRHAPAETIG SGDQTPSNPK 780 LQTAPAVKID NAARSRAAGT SEAGAGAGTR PRRDELVFLQ EGRVRFEIED LLRASAEVLG 840 SGNFGSSYKA ALGEEPAVVV KRFKDMNGVG REDFSEHMRR LGRLRHPNLL PLVAYLYKKD 900 QKLLITDYMV NGSLAQLLHG NRGSILDWGK RLQIIKGAAR GLTHLYDELP MLTVPHGHLK 960 SSNVLLDDAF EAVLSDYALV PVVTSQIAAQ VMVAYKSPEC TAPHGKPSKK SDVWSLGILI 1020 LEVLTGKFPA NYLGKGRQNT DLAGWVHSVV AEERNDEVFD KDITGARGAE ADMVKLLQVG 1080 LGCCDADVDR RWDLKMAIAR IDEIPVPDTV VAVGDSTPSL PNAGDQRS

Sequence ? help Back to Top

Protein Sequence Length: 1128 aa Download sequence Send to blast

MAGAARCTVR WCDGWAWTPR PATATWPASS TADSRVAASA SQLLRLRTSA AVDRPEWWKQ  60
RARPRAQGPD LAGLHQSASK ATAVSGRRPA ARCSSTRGPT ASLAGSPSRS TTNKISELTH  120
HFISLELTRA SSSLPHRLTP LSRSMDPPTD DDPPCIIQAL RASSSTVPAP PLVQALPALQ  180
SPAKDHAPSS SSSSSRPPKR QPPQQPAAPP PCPRPPSPRR TRSGGAPEWT PAETLALVAE  240
VAAVDDGWSR SVSAFQKWAM VAENLAASES FASGLARRGK RAAGECRRRW EALEADYGAV  300
RRWEVRTGLR YREMSVAARR KAGLPAEFDA EVFGAMDALI RVEEALLANA AGGGGGAGEE  360
VEGLVGGSAV VEVGEEDTGV PEIGEDEVKE DELVDEAQED ESANEIEDED GREDDKEMQP  420
DNGNADTSNS FEEGCEAEAV ETNSKTENSQ NIVWELANKL QENAQHIHTI LNDEANECGN  480
ENHALAYSMS PDAMETTRQK ADELIKSLGG LLGYLNQFTE LIEESGFENK RQQQTQQLGE  540
ALPCLLPPIL RPPASRPLAA CPPRHPLAFP RRCTCRTRSL TTLPRRRVHC CVRPLPPRQR  600
GANFDERPCN DRLVRRDDDS APPARVAMVR PRPHDHLRLA IVLVIAAAAL LTRAAAQNGG  660
RSEADVLIAF RDTLRGADGA PPGPLRSWGT PGPCQGTVSS RFNATMFAGN NFLCGKPLDV  720
ECDESGSPRS GVSALMIAAI VIIILGVLLC VAGIVTGVLG SRHAPAETIG SGDQTPSNPK  780
LQTAPAVKID NAARSRAAGT SEAGAGAGTR PRRDELVFLQ EGRVRFEIED LLRASAEVLG  840
SGNFGSSYKA ALGEEPAVVV KRFKDMNGVG REDFSEHMRR LGRLRHPNLL PLVAYLYKKD  900
QKLLITDYMV NGSLAQLLHG NRGSILDWGK RLQIIKGAAR GLTHLYDELP MLTVPHGHLK  960
SSNVLLDDAF EAVLSDYALV PVVTSQIAAQ VMVAYKSPEC TAPHGKPSKK SDVWSLGILI  1020
LEVLTGKFPA NYLGKGRQNT DLAGWVHSVV AEERNDEVFD KDITGARGAE ADMVKLLQVG  1080
LGCCDADVDR RWDLKMAIAR IDEIPVPDTV VAVGDSTPSL PNAGDQRS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5uv4_A	2e-36	814	1090	5	296	Putative leucine-rich repeat protein kinase family protein

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00950.1.g00030.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1228	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	6e-14	sequence-specific DNA binding transcription factors