PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00816.1.g00080.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 322aa    MW: 35869 Da    PI: 4.7037
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00816.1.g00080.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.3e-091557347
                                    SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                 Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                    +WT +E+e + +a +q G++ +++I ++++  +   q++++++ +
  Zpz_sc00816.1.g00080.1.sm.mkhc 15 AWTRQEEENFFNALRQVGKN-FEKITHRVQ-SKNKDQVRHYYYRL 57
                                    6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129313.1671162IPR017884SANT domain
SMARTSM007175.1E-71260IPR001005SANT/Myb domain
SuperFamilySSF466892.24E-101261IPR009057Homeodomain-like
CDDcd001675.02E-71558No hitNo description
PfamPF002493.0E-71557IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.5E-61560IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MPNAKSAPGT RQWAAWTRQE EENFFNALRQ VGKNFEKITH RVQSKNKDQV RHYYYRLVRR  60
MKKLLGPEFS LDAKDSKDTI AAMLRWSQQG SSGAVASAAY KKWERAAMAG VSLVADAAEE  120
LERSTIDPNV LCNVDAKTFT SSSNNLSTDG ISINPMKEAD SQAPAKLKLQ LFPINEATRK  180
ALEKDDQEMN SAALSEGEWA DTLTDISVGY LLTEASKDLA GAEVADNPHT DNAKDTEELC  240
AESTTRNSDH NELKDQFLAD IYWPDSLGPL DLDIPSVRYQ AADLLLGDSQ NSWSRMMANS  300
LDAFRNLSFF SMDKNDSIPP IM
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00816.1.g00080.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519292e-67JF951929.1 Triticum aestivum clone TaMYB46 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021301922.12e-45TSL-kinase interacting protein 1-like isoform X1
RefseqXP_021301926.12e-45TSL-kinase interacting protein 1-like isoform X1
RefseqXP_021301929.12e-45TSL-kinase interacting protein 1-like isoform X2
RefseqXP_021301935.12e-45TSL-kinase interacting protein 1-like isoform X3
SwissprotQ8LJT82e-38TKI1_ARATH; TSL-kinase interacting protein 1
STRINGPavir.J22108.1.p3e-46(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54783643
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.11e-40TSL-kinase interacting protein 1