PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00802.1.g00080.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 308aa    MW: 32902 Da    PI: 7.6093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00802.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2392e-124279243
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAa 43
                                  +ykGVr+++ +g+Wv+eIr+p +   r r +lg++  +e Aa
  Zpz_sc00802.1.g00080.1.am.mk 42 KYKGVRRRP-WGKWVSEIRVPGT---RERLWLGSYAAPEAAA 79
                                  8********.**********943...5**********99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.4614279IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-164280IPR001471AP2/ERF domain
CDDcd000184.33E-124272No hitNo description
SMARTSM003802.3E-942114IPR001471AP2/ERF domain
PfamPF008475.1E-64279IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-114281IPR016177DNA-binding domain
PRINTSPR003675.1E-74354IPR001471AP2/ERF domain
PRINTSPR003675.1E-76581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MRSCGDQHGN TARAHAYRTD DAGGEMSRSM ASGGAEPRRC NKYKGVRRRP WGKWVSEIRV  60
PGTRERLWLG SYAAPEAAAV XXXXXXPERA ASYAAAHHRS RLSPRSVQRV ASDAGMAADA  120
QLLEAWERAS PTTTTAAQQV ASVGIGVARG GDEELEPWPC PYAPPTWNDG SRATAGSWAT  180
APRADGSGSS SAGTCEDGRQ LVYGDISVDD MEILIHGDGP FWRLARLHCS PPPPVSMAFR  240
GRRPAENEYQ VHEPGSNALS DASHLSMHVV CLGLGLGLGV GVNGFSSTGH LDHRLKEQVG  300
GASPFEPR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00802.1.g00080.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9545304e-39EU954530.1 Zea mays clone 1469452 transcriptional factor TINY mRNA, complete cds.
GenBankKJ7276764e-39KJ727676.1 Zea mays clone pUT5603 AP2-EREBP transcription factor (EREB63) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004970828.14e-32ethylene-responsive transcription factor ERF020
TrEMBLA0A368RE339e-31A0A368RE33_SETIT; Uncharacterized protein
STRINGGRMZM2G307152_P014e-28(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.13e-18ERF family protein