PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00801.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 471aa    MW: 52130.2 Da    PI: 7.4276
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00801.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.65e-1913113189
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk......kvkaeekewyfFskrdkkyatgkrk 74 
                                   lppGfrF+Ptdeel+ +yL++k+++  +    +++evd+yk+ePwdL p+         +e++  yfF+ r+ k ++g r+
  Zpz_sc00801.1.g00050.1.am.mk  13 LPPGFRFRPTDEELLAHYLARKAADAGFYS-AAVREVDLYKAEPWDLlPAagggggDDGSEDSCRYFFCARRVKFPSGLRS 92 
                                   79*************************888.78**************544455543222244455*********9987766 PP

                           NAM  75 nra......tksgyWkatgkd 89 
                                   + +      + +  W+ +g  
  Zpz_sc00801.1.g00050.1.am.mk  93 EDQqgdarrVLEVHWEGQGVA 113
                                   553222222346677777755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.32E-21993IPR003441NAC domain
PROSITE profilePS5100519.59613195IPR003441NAC domain
PfamPF023652.3E-1014110IPR003441NAC domain
Gene3DG3DSA:3.90.1410.101.9E-23362471No hitNo description
SuperFamilySSF821992.01E-17363471No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0018023Biological Processpeptidyl-lysine trimethylation
GO:0009570Cellular Componentchloroplast stroma
GO:0003677Molecular FunctionDNA binding
GO:0016279Molecular Functionprotein-lysine N-methyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MGNDNCDRPC TGLPPGFRFR PTDEELLAHY LARKAADAGF YSAAVREVDL YKAEPWDLLP  60
AAGGGGGDDG SEDSCRYFFC ARRVKFPSGL RSEDQQGDAR RVLEVHWEGQ GVAATARLRR  120
RRWRQPSWGE EDARVLQGMF MKKPPGEETT PYQEKILRPL VDDHHMQIMP TGGKTPAAAT  180
VAAGSEHVSC FYDDAEAKTP DDHEKFQSLP QLNPEELLLN WPEQDDLPSS VLAQATVLYE  240
EVAANLSHII NHIRRSRRPG LLPWCCVSFR SHAGDARLTK GTRLLQLNKL LDSWSSEPSI  300
PSPPLSPLAA RHRAMDALHH HPLLSVRHRP LPPSFRMIQR PLRPHRLIPR AAASTSTTLV  360
DSALQDFRRW LSSHGAGEGK AYPAAVPEGL GLVAVRDVPR GEVVAEVPKK LWMDADAVAA  420
SDIGRACAGG DLRPWVAVAL LLLREVARGA DSPWAPYLAV LPRQTDSTIF W
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mlv_B1e-263634719116Ribulose-1,5 biphosphate carboxylase/oxygenase large subunit N-methyltransferase
1mlv_C1e-263634719116Ribulose-1,5 biphosphate carboxylase/oxygenase large subunit N-methyltransferase
1ozv_A1e-263634719116Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast
1ozv_B1e-263634719116Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast
1ozv_C1e-263634719116Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast
1p0y_A1e-263634719116Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast
1p0y_B1e-263634719116Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast
1p0y_C1e-263634719116Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast
2h21_A9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase
2h21_B9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase
2h21_C9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase
2h23_A9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h23_B9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h23_C9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h2e_A9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h2e_B9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h2e_C9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h2j_A9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h2j_B9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
2h2j_C9e-273634715112Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116123RLRRRRWR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00801.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4393333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.22e-19NAC domain containing protein 80