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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zpz_sc00760.1.g00330.1.sm.mk | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | NAC | ||||||||
| Protein Properties | Length: 66aa MW: 7653.59 Da PI: 5.0063 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 27.5 | 8.5e-09 | 21 | 45 | 1 | 25 |
NAM 1 lppGfrFhPtdeelvveyLkkkveg 25
lppGfrFhP dee++++yL +k eg
Zpz_sc00760.1.g00330.1.sm.mk 21 LPPGFRFHPYDEEIITFYLMPKNEG 45
79******************99876 PP
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| Protein Features ? help Back to Top | ||||||
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF101941 | 5.23E-15 | 18 | 66 | IPR003441 | NAC domain |
| PROSITE profile | PS51005 | 12.485 | 21 | 66 | IPR003441 | NAC domain |
| Pfam | PF02365 | 6.2E-7 | 22 | 63 | IPR003441 | NAC domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 66 aa Download sequence Send to blast |
MADHQEQEGI RGGVDDCCMN LPPGFRFHPY DEEIITFYLM PKNEGRINRA TNTGFWKATG 60 KDKEIY |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | Zpz_sc00760.1.g00330.1.sm.mk |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G29035.1 | 2e-13 | NAC domain containing protein 3 | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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