PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00759.1.g00030.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ARR-B
Protein Properties Length: 565aa    MW: 61051.9 Da    PI: 6.1594
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00759.1.g00030.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.86.9e-25182234255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   +r +W+ e H++Fve+v+qL G +k +Pk+ilelm+++gLt+ehv+SHLQkYRl
  Zpz_sc00759.1.g00030.1.sm.mk 182 KRFQWSGERHRKFVEVVKQL-GMDKVVPKNILELMNLEGLTREHVASHLQKYRL 234
                                   799*****************.********************************7 PP
2Response_reg37.51.2e-1366133163
                                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH......ESEEEEESSCTTSEHHHHHH CS
                  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd......pDlillDiempgmdGlellk 63 
                                   vl vdD+ + ++l+ + l++ +y +v+++ ++e ale+l++++      ++++++D+ mp+mdG++ll+
  Zpz_sc00759.1.g00030.1.sm.mk  66 VLAVDDDGVSLMLISRQLQHCKY-NVTTVMHAEMALEILRARRdhgadqFHMVITDVHMPEMDGFKLLE 133
                                   799********************.***************8888899999*****************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521727.54E-1662136IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23009.0E-1862136No hitNo description
SMARTSM004489.3E-664218IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011019.83265224IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.5E-1066134IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.93E-1167142No hitNo description
PROSITE profilePS5129410.861178237IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-25179239IPR009057Homeodomain-like
SuperFamilySSF466895.2E-18179238IPR009057Homeodomain-like
TIGRFAMsTIGR015579.4E-22182235IPR006447Myb domain, plants
PfamPF002498.1E-6185233IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    Send to blast
MVSVAAADVP MASEAREKPE EMPLGTSYAG PPVTLAPLPS VMDLVPLLLD GEQRMDADEF  60
RSRLRVLAVD DDGVSLMLIS RQLQHCKYNV TTVMHAEMAL EILRARRDHG ADQFHMVITD  120
VHMPEMDGFK LLEIVSLEMD IPSRDGEAEN GANHNIKCST NKRKDGCGTG KEKKKTSAPK  180
RKRFQWSGER HRKFVEVVKQ LGMDKVVPKN ILELMNLEGL TREHVASHLQ KYRLFLKKLG  240
SGTFKCNGPF TDEAMRSAGN SININGHGRF QPNPEHGSSR YYHPSIPLVG SSGASSNPFA  300
RLNSFAAFGK QSLLPTQSVQ LMTQRNLGNP LKDMGPVGYG GNMPQVAAPG SHYSLSNFIY  360
AGTSNTNMCI PPSPSGIISF ANPSNGMPLD QQPLGSIAPF NGSPNSLQTV ASWKGEISEA  420
GSLKGDMHTI NQLSRLAVSS GPNYEIQNQI VAVTGIATTT PKTYFNENVA PPYIGSSTNC  480
IVMTNDTSAP GGASMAVSTL PSLQMNEPVL SSYVLTGGAE GGAVDQQAVG EQLNDNNEFL  540
TAPSTTQNGK NDDLDDFLDD WLNEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A9e-19181237157Transcription factor LUX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161182KRKDGCGTGKEKKKTSAPKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00759.1.g00030.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1872246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-44response regulator 12