PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00735.1.g00060.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 195aa    MW: 20796.8 Da    PI: 5.0215
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00735.1.g00060.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.4e-1668115355
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   y+G+r ++ +g+Wv+eIr+p+    +  r++lg++ tae+Aa+a++ a+++l+g
  Zpz_sc00735.1.g00060.1.sm.mk  68 YRGIR-CR-SGKWVSEIREPR----KaSRIWLGTYPTAEMAAAAYDVAARALRG 115
                                   9***9.55.6*********94....36*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.60967126IPR001471AP2/ERF domain
SMARTSM003801.3E-2367129IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-1567120IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.8E-2368119IPR001471AP2/ERF domain
CDDcd000182.90E-1368119No hitNo description
PfamPF008478.5E-968115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MAEQQQQQSP VSSPPDTQAP PHQGPGPRHP SSVVQAGDAT TGVSTAPTAA ATSSGEPSPR  60
SSGKHAFYRG IRCRSGKWVS EIREPRKASR IWLGTYPTAE MAAAAYDVAA RALRGTDARH  120
GVTSSATADA SSCAPQQEFG NDEFMDEEAI FEMPQLLRNM AAGMMMSPPR LSPYTSDESP  180
DPSEAGESLW SYRDP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00735.1.g00060.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0988961e-87FP098896.1 Phyllostachys edulis cDNA clone: bphylf043a21, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159886.11e-57ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ901e-32ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A0D9VJG68e-67A0A0D9VJG6_9ORYZ; Uncharacterized protein
STRINGLPERR02G22600.11e-67(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36542762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-29ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]