PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00522.1.g00380.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 834aa    MW: 90114.4 Da    PI: 5.22
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00522.1.g00380.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.21.2e-26596645251
                        RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                                   ek++sle+l++yFs+ +kdAA++Lgvc+T++KriCRq+GI+RWP+R+i++
  Zpz_sc00522.1.g00380.1.am.mk 596 EKTVSLEELQRYFSGRMKDAARSLGVCPTTMKRICRQHGISRWPFRQIAK 645
                                   799*********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.006582666IPR003035RWP-RK domain
PfamPF020426.7E-24598645IPR003035RWP-RK domain
SuperFamilySSF542771.37E-18724796No hitNo description
PROSITE profilePS5174517.206729822IPR000270PB1 domain
SMARTSM006661.6E-17729822IPR000270PB1 domain
PfamPF005641.8E-13730799IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2409.1E-21730796No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    Send to blast
MECAEKMECD AIPTELKETA TYLLTALPGV DGIAQTKSIC KLNIVNPCTR NRSFSAFVSS  60
SRRVDLLHAM ERGADMDTVL RSFDHLLDRD GARGSSAGWW RYSIRCGSDD RSRSGGSAAG  120
KVRDTVDGCA AVKERIARAL RIYKEAAEHD DGERSAGGGV LPFVLAPPQC HRLFQYRTVS  180
LTHAFPVGGP GAAAPGERGM PGRVFDAGTP EWTPNVQYYG TGEYARISYA LIYDIQAALA  240
LPILEPDTGA CLAVLELVMT SPRLRFADEV DKLCKALQAV ELRGSDICCP VAEVCSDEAA  300
EQAMSEVSDV LTTVCEAHQL PLAQAWVRCK RCNSTSMEHA SLTTAGAPFH LSGDEGVRGF  360
REACVEQHLR EGRGGLVEGA ATARGPRFCA DVTKYSMDEY PLAHHARFSG LAGCLAVCVE  420
LRRDAGGEGG REECVLEFFL PPDCSDGQAQ KAAVEAVAAT IRECFGNGDL KAIALCGSQD  480
LAFEIVADDE CVLRPDRAIM ADAPDPELQL ENHGRYAPDH TIMADTPDPE LQLDNHGGYV  540
RDSDDEDVHL SAAIRGADVD APEMKNDEQK EDEDPEPQDG NSRTRRKKKV GKRKNEKTVS  600
LEELQRYFSG RMKDAARSLG VCPTTMKRIC RQHGISRWPF RQIAKANSSL DKVKRIFESV  660
QYSPQPMAAP AASQQAPALA TAHGPPAALP CLSSAHGVAS SQGSCQEPPP PRKRSITRKP  720
FHAGDTEGLV TVKASYRGDI VRFRVPSFAG VEAVKGQVAK RLGLEMDAFD LKYLDDDNEW  780
VLLSCDADFQ ECLEVFPALS TASSSSGSGA AQPVVRLMVQ EVADNHGSSC ASSD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00522.1.g00380.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823617.10.0protein NLP3-like
TrEMBLA0A2S3GLE70.0A0A2S3GLE7_9POAL; Uncharacterized protein
STRINGSi016430m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62692939
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.19e-88Nin-like family protein