PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00516.1.g00180.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 250aa    MW: 27111.7 Da    PI: 10.1788
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00516.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.95.9e-1484128149
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 
                                   + y+GVr++  +g Wv+eIr+p++   + r++lg++ ta++Aa a+ ++
  Zpz_sc00516.1.g00180.1.am.mk  84 PSYRGVRRRD-WGVWVSEIREPRK---KSRIWLGTYPTAKMAASARRRC 128
                                   57*****988.**********843...6****************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-884124IPR001471AP2/ERF domain
CDDcd000187.35E-1584122No hitNo description
SuperFamilySSF541719.15E-1385127IPR016177DNA-binding domain
SMARTSM003805.5E-1185145IPR001471AP2/ERF domain
PROSITE profilePS5103217.42585142IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.9E-1985125IPR001471AP2/ERF domain
PRINTSPR003671.7E-88697IPR001471AP2/ERF domain
PRINTSPR003671.7E-8108124IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MEIAGELRAP ITPSSSSSSS NSSSSCAIDT TVTQVLLNAK HDSKTSKQRR RSYSPPAPGS  60
SSGRRQPEHD AAGRRITGCA GRHPSYRGVR RRDWGVWVSE IREPRKKSRI WLGTYPTAKM  120
AASARRRCGR RQGARRRALQ LPAPRAHTPA AGVHLARRRP GRGPEXXAKT VSVSLSPAAS  180
GGEVAADDSE ENTAAFFECL PDLLLDLRDG LMWSADVWAD DAASSVAEEC NDGGDDVFGG  240
VHLWPDQFWT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00516.1.g00180.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4850123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.16e-11ERF family protein