PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00514.1.g00080.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 886aa    MW: 94842.6 Da    PI: 8.1734
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00514.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.51.4e-071711972955
                           AP2  29 krfslgkfgtaeeAakaaiaarkkleg 55 
                                    r +lg+f+tae Aa+a++aa+++l g
  Zpz_sc00514.1.g00080.1.am.mk 171 CRLWLGTFDTAEAAARAHDAAMLALAG 197
                                   689*******************99866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.882139205IPR001471AP2/ERF domain
SMARTSM003806.7E-5158211IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-10167207IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-15169207IPR001471AP2/ERF domain
PfamPF008472.6E-4170197IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-5658682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 886 aa     Download sequence    Send to blast
MGTGRLVESE APKSWVLSAS PANCKWASGS GRPCTFVHSQ HALRLWFCFC PPFGESLRRT  60
PGEWFSVSRL RFTYSRRWDG FPRVRDRWCI PLADSSCELC SVHFPRSPDL YLVGAPTPDG  120
VYVAAAEAAS GADQVPRDEA PGVPRRPAPG PCRAVGVRGA RPRAXXXXRG CRLWLGTFDT  180
AEAAARAHDA AMLALAGAGA CLNFADSAWL LAVPASYASL AEVRRAVADA VEEFQRREAL  240
AGEEEEAGSS AHSSPANDGE YSTEGEESSS LAAEDAAFDL DVFSDMSWDL YYASLAQAML  300
LEPPSLATAF VDDDVVEAPV VMLTGPSAAP PTVVNQNALA NANGGPPVVP GVTEQAGGRI  360
SSPAARVGIT TSPSHIRRKK PNQGTQQSAY LRIDWLNGRA FGHGSPPVAS EKTIAEGRRW  420
RHGCGGSSDH DRMLCSSLLT AASRGRSASL LQHQGRLEDS TRLAEKIDLR SSPPARSRSR  480
HKRPSPSLRV APCLDLERTD PINRSLESRR VPHDGPESGG KAKHLSHKLG KGAIDRVMAL  540
KKQVAKYRRP KATTCGSFPV PPLFLTPDVW AAALGYPARK LPSKLVSGLS ADASPCFPLL  600
AISSLVLCFP TCRLPRFALC SAPSFTYKYA SSNPPCPSQN HSTQHSSSTR AKQPNHPAAA  660
RAHDAAMLVM AGAGACLNFA DSAWLLAMPA SFRSLDDVRH AVAEAVEEFQ HREAHAKDDA  720
LSSVATPSSS SVDSCSNDAD EGKESSPAPE DDAVFELDVF NDMSWDLYYA SLAQGMLVEP  780
PCAVAAFGDD GEAHQESRSN DGRGLHGNCL LARVPVQKIA PWGRRPRPRV AIEPGAPSSR  840
PVVQSTSRSR RTTNVVRGRL VPRKQHEGGR GEEVGISCCR LRAGSG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00514.1.g00080.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-