PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00513.1.g00100.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 255aa    MW: 27588 Da    PI: 7.0033
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00513.1.g00100.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18e-1793142355
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +gr++AeIrd + +g  +r+++g+f+t+e Aa a+++a+ + +g
  Zpz_sc00513.1.g00100.1.sm.mk  93 FIGVRKRP-WGRFAAEIRDSTRRG--ARVWIGTFDTPEAAALAYDQAAFAARG 142
                                   78******.**********43343..**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.37792150IPR001471AP2/ERF domain
SMARTSM003804.9E-3092156IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-2093152IPR016177DNA-binding domain
CDDcd000181.28E-1193127No hitNo description
Gene3DG3DSA:3.30.730.102.3E-2793151IPR001471AP2/ERF domain
PRINTSPR003677.8E-893104IPR001471AP2/ERF domain
PfamPF008478.7E-1394142IPR001471AP2/ERF domain
PRINTSPR003677.8E-8116132IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MEQHLIQHPS HAAVAQHGSM PPPPFGTGDS VDMKMHLEAL MLFLEVEADE SSDSLSSSSS  60
RDSSLQAGTE SVTATACDAH QWQGSSTAVE KPFIGVRKRP WGRFAAEIRD STRRGARVWI  120
GTFDTPEAAA LAYDQAAFAA RGASAVLNFP VECVQESLRP LALPDAAGGG SPVLALKRRH  180
SKRTRRSKLS LSSNDLIRPQ RRKARRCSGE SSYSTPAVVA HALETPVCRC GVVELEDLGA  240
DYLEELLRVS SELQH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-23931531575Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199205QRRKARR
Functional Description ? help Back to Top
Source Description
UniProtMay act as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:11950980}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00513.1.g00100.1.sm.mk
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Weakly induced by Pseudomonas syringae tomato (avirulent avrRpt2 strain), but also by mock inoculation. {ECO:0000269|PubMed:11950980}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022685222.15e-59LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF094-like
SwissprotQ8VYM01e-40ERF93_ARATH; Ethylene-responsive transcription factor 15
TrEMBLA0A2T7CMG48e-59A0A2T7CMG4_9POAL; Uncharacterized protein
STRINGSi033089m2e-51(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06160.13e-27octadecanoid-responsive Arabidopsis AP2/ERF 59
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhang H, et al.
    Arabidopsis AtERF15 positively regulates immunity against Pseudomonas syringae pv. tomato DC3000 and Botrytis cinerea.
    Front Plant Sci, 2015. 6: p. 686
    [PMID:26388886]