PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00511.1.g00120.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 291aa    MW: 30784.3 Da    PI: 5.3584
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00511.1.g00120.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-20112161255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa  +++a+ +l+g
  Zpz_sc00511.1.g00120.1.sm.mk 112 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALVYDQAAYRLRG 161
                                   59******9.**********955...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.16E-29111171No hitNo description
Gene3DG3DSA:3.30.730.109.9E-32112171IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-22112171IPR016177DNA-binding domain
SMARTSM003803.5E-34112175IPR001471AP2/ERF domain
PROSITE profilePS5103222.853112169IPR001471AP2/ERF domain
PfamPF008472.1E-13113161IPR001471AP2/ERF domain
PRINTSPR003671.0E-10113124IPR001471AP2/ERF domain
PRINTSPR003671.0E-10135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAAAIDQSAE ELMRALEPFI RDASAPHGSI PLIPHQLASP PSPFAFHDAS AAAACISYAG  60
AGAGQLSPAQ MQYIQARLHL QQRQAQSSVL GPRAPPMKAA AAAAPLPRPQ KLYRGVRQRH  120
WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL VYDQAAYRLR GDAARLNFPD NAAARGPLDA  180
SVDAKLQALC ENIAASKKAS KASEAAAATS SSAPTSDCSS PSSDDASSSS LESAESSPSP  240
SLSPSLSPEA TTVPEMQQLD FSEAPWDEAA GFALTKYPSY EIDWDSLLAA N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-20111169463ATERF1
3gcc_A8e-20111169463ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00511.1.g00120.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956678.11e-141ethylene-responsive transcription factor RAP2-13
TrEMBLK3ZVQ31e-140K3ZVQ3_SETIT; Uncharacterized protein
STRINGSi030684m1e-141(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38235203
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-44related to AP2 4