PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00505.1.g00180.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 381aa MW: 42001 Da PI: 11.1939

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00505.1.g00180.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	58.5	1.3e-18	46	86	8	48
RWP-RK 8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ++l+ +F+l i+dAA eLg+c++ LKriCR +G++RWP R Zpz_sc00505.1.g00180.1.am.mk 46 QVLATHFHLRIEDAAAELGICQSSLKRICRSHGVPRWPGRM 86 57999*********************************996 PP
2	RWP-RK	40.4	5.6e-13	118	157	13	52
RWP-RK 13 yFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 F+l i+dAA e +c++ LK iC ++G++RWP k+++l Zpz_sc00505.1.g00180.1.am.mk 118 RFHLRIEDAATEQCICQSSLKSICHKHGVPRWPGTKLSKL 157 7*********************************999986 PP
3	RWP-RK	29.7	1.3e-09	290	321	14	45
RWP-RK 14 FslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +l ++dAA+ Lg+++ LK CR +G+ RWP Zpz_sc00505.1.g00180.1.am.mk 290 LHLRLNDAASALGISTDRLKFVCRSNGLCRWP 321 6999**************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.822	25	110	IPR003035	RWP-RK domain
Pfam	PF02042	8.9E-18	47	86	IPR003035	RWP-RK domain
Pfam	PF02042	4.5E-12	118	157	IPR003035	RWP-RK domain
PROSITE profile	PS51519	11.138	264	354	IPR003035	RWP-RK domain
Pfam	PF02042	4.7E-8	288	321	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence Send to blast
MEVLMAAAAR GRTERKRLGF RKEPQKIPCK VAGEVERFWG STACPQVLAT HFHLRIEDAA 60 AELGICQSSL KRICRSHGVP RWPGRMVWFR LEQLSKLAME AMARLGAAPG EDSGHRPRFH 120 LRIEDAATEQ CICQSSLKSI CHKHGVPRWP GTKLSKLAME AMGRQREQHQ GKKVGIVVRK 180 WSPRASARFL MRSLGFFSSQ MLPQYCRNKA VLVQVQLSKS PQAMVDCPPK KSVAVVLGYL 240 KARMRDTGQP TLCQATWPPP STEKKATLVV LTMPRRRAAS PPWSEVLGVL HLRLNDAASA 300 LGISTDRLKF VCRSNGLCRW PGMTVRMNAS IRSGDSLNAK LRRLIQEAAL ARAEASSIAM 360 VASPSSSSPG NDHAGGQKGD S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence Send to blast

MEVLMAAAAR GRTERKRLGF RKEPQKIPCK VAGEVERFWG STACPQVLAT HFHLRIEDAA  60
AELGICQSSL KRICRSHGVP RWPGRMVWFR LEQLSKLAME AMARLGAAPG EDSGHRPRFH  120
LRIEDAATEQ CICQSSLKSI CHKHGVPRWP GTKLSKLAME AMGRQREQHQ GKKVGIVVRK  180
WSPRASARFL MRSLGFFSSQ MLPQYCRNKA VLVQVQLSKS PQAMVDCPPK KSVAVVLGYL  240
KARMRDTGQP TLCQATWPPP STEKKATLVV LTMPRRRAAS PPWSEVLGVL HLRLNDAASA  300
LGISTDRLKF VCRSNGLCRW PGMTVRMNAS IRSGDSLNAK LRRLIQEAAL ARAEASSIAM  360
VASPSSSSPG NDHAGGQKGD S

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00505.1.g00180.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP47126	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	9e-09	Nin-like family protein