PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00498.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 243aa    MW: 26070.2 Da    PI: 9.391
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00498.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.8e-1781130355
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr+++ +gr++AeIrd + ng  +r++lg+f++ae Aa a+++a+++ +g
  Zpz_sc00498.1.g00020.1.am.mk  81 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWLGTFDSAEAAAMAYDQAALSARG 130
                                   57******.**********44465..***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.2E-3080144IPR001471AP2/ERF domain
PROSITE profilePS5103221.83880138IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-2181140IPR016177DNA-binding domain
PfamPF008471.4E-1281130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-2781139IPR001471AP2/ERF domain
CDDcd000182.88E-1681139No hitNo description
PRINTSPR003673.6E-88192IPR001471AP2/ERF domain
PRINTSPR003673.6E-8104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MCYGPTPTVP PTEHPQGYFL YSQADHTATA AMSSSSSSSS DYLSFNTIGS GDAVPAPTSV  60
PAAAAVARRE RERASPNKEA FIGVRRRPWG RFAAEIRDST RNGARVWLGT FDSAEAAAMA  120
YDQAALSARG PTAALNFPVE RVRESLHALA LGGAAACGGS PVLELKSRHS KRKRRKKSEI  180
IAAAAAAVNG TVLGRNKAKN KGALAEQKRF VVELEDLGAE YLEELLRISE FDDQGLQELH  240
RDQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-23811401574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170175KRKRRK
2170176KRKRRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00498.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571392.29e-53ethylene-responsive transcription factor 15
TrEMBLA0A2K2CX696e-51A0A2K2CX69_BRADI; Uncharacterized protein
STRINGPavir.Ba02374.1.p5e-55(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-23ethylene response factor 1