PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00385.1.g00540.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 326aa    MW: 36581.4 Da    PI: 7.026
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00385.1.g00540.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.11.5e-48131393128
                             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                     pGfrFhPt+eel+++yL+  v+gkkl++ ++i +++iy++ePwdLp ++k++e+ewyfF++rd+++ +g r+nr+t++g
  Zpz_sc00385.1.g00540.1.sm.mkhc  13 PGFRFHPTEEELLDFYLHCVVHGKKLNF-DIIGTLNIYRHEPWDLPGMAKTGEREWYFFVPRDRRAGSGGRPNRTTEHG 90 
                                     9*************************99.99***************999999*************************** PP

                             NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                     +Wkatg+d+++ s+   ++++glkktLvfykgrap+g+ktdWvm+eyrl
  Zpz_sc00385.1.g00540.1.sm.mkhc  91 FWKATGSDRAIRSSadAKRVIGLKKTLVFYKGRAPRGTKTDWVMNEYRL 139
                                     ************99777888***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-563166IPR003441NAC domain
PROSITE profilePS5100553.71511166IPR003441NAC domain
PfamPF023652.0E-2413139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MAMASMEMEQ DLPGFRFHPT EEELLDFYLH CVVHGKKLNF DIIGTLNIYR HEPWDLPGMA  60
KTGEREWYFF VPRDRRAGSG GRPNRTTEHG FWKATGSDRA IRSSADAKRV IGLKKTLVFY  120
KGRAPRGTKT DWVMNEYRLP EFGFATGRAA PAPPKEDMVL CKIYRKATPL KELEQRASDM  180
EERQRSSNLD YVPRAPLVRV TPSAGDDYLS PDDGHDSFLI PSSSSSASPP SEYSYSYNAP  240
IMEAKKEADA TVTLAAMSLP PLQPVTATPA AVNVPSTQHP TARHGDLPSL QVPANHGVFD  300
WLQDPFLLRS PWQDQLFLSP LANLLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-451316822170NAC domain-containing protein 19
3swm_B1e-451316822170NAC domain-containing protein 19
3swm_C1e-451316822170NAC domain-containing protein 19
3swm_D1e-451316822170NAC domain-containing protein 19
3swp_A1e-451316822170NAC domain-containing protein 19
3swp_B1e-451316822170NAC domain-containing protein 19
3swp_C1e-451316822170NAC domain-containing protein 19
3swp_D1e-451316822170NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00385.1.g00540.1.sm.mkhc
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025795753.11e-167NAC domain-containing protein 22
SwissprotQ10S651e-135NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A3L6S6V01e-167A0A3L6S6V0_PANMI; NAC domain-containing protein 67-like
STRINGPavir.J24394.1.p1e-160(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.16e-85NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]