PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00385.1.g00540.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 326aa MW: 36581.4 Da PI: 7.026 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.1 | 1.5e-48 | 13 | 139 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 pGfrFhPt+eel+++yL+ v+gkkl++ ++i +++iy++ePwdLp ++k++e+ewyfF++rd+++ +g r+nr+t++g Zpz_sc00385.1.g00540.1.sm.mkhc 13 PGFRFHPTEEELLDFYLHCVVHGKKLNF-DIIGTLNIYRHEPWDLPGMAKTGEREWYFFVPRDRRAGSGGRPNRTTEHG 90 9*************************99.99***************999999*************************** PP NAM 82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wkatg+d+++ s+ ++++glkktLvfykgrap+g+ktdWvm+eyrl Zpz_sc00385.1.g00540.1.sm.mkhc 91 FWKATGSDRAIRSSadAKRVIGLKKTLVFYKGRAPRGTKTDWVMNEYRL 139 ************99777888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-56 | 3 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.715 | 11 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-24 | 13 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MAMASMEMEQ DLPGFRFHPT EEELLDFYLH CVVHGKKLNF DIIGTLNIYR HEPWDLPGMA 60 KTGEREWYFF VPRDRRAGSG GRPNRTTEHG FWKATGSDRA IRSSADAKRV IGLKKTLVFY 120 KGRAPRGTKT DWVMNEYRLP EFGFATGRAA PAPPKEDMVL CKIYRKATPL KELEQRASDM 180 EERQRSSNLD YVPRAPLVRV TPSAGDDYLS PDDGHDSFLI PSSSSSASPP SEYSYSYNAP 240 IMEAKKEADA TVTLAAMSLP PLQPVTATPA AVNVPSTQHP TARHGDLPSL QVPANHGVFD 300 WLQDPFLLRS PWQDQLFLSP LANLLY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
3swm_B | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
3swm_C | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
3swm_D | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
3swp_A | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
3swp_B | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
3swp_C | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
3swp_D | 1e-45 | 13 | 168 | 22 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00385.1.g00540.1.sm.mkhc |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025795753.1 | 1e-167 | NAC domain-containing protein 22 | ||||
Swissprot | Q10S65 | 1e-135 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A3L6S6V0 | 1e-167 | A0A3L6S6V0_PANMI; NAC domain-containing protein 67-like | ||||
STRING | Pavir.J24394.1.p | 1e-160 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 6e-85 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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