PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00356.1.g00050.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 314aa MW: 34300.2 Da PI: 4.6203 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.7e-19 | 139 | 190 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g++vAeIrdp+ +g r++lg+++ + +Aa+a+++a+ +++g+ Zpz_sc00356.1.g00050.1.am.mk 139 KYRGVRQRP-WGKYVAEIRDPKRRG--SRVWLGTYDVPIDAARAYDRAAFRMRGA 190 8********.**********96554..**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.1E-31 | 138 | 198 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.6E-35 | 139 | 203 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.47E-18 | 139 | 198 | No hit | No description |
PROSITE profile | PS51032 | 23.156 | 139 | 197 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.44E-21 | 139 | 198 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.7E-13 | 139 | 189 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.6E-13 | 140 | 151 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.6E-13 | 179 | 199 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MDFTGDADYF FDLDFIREHL LGSDNGVPVT SWVVSEDSSF PVLPPPAAEP ACQHVPFLSQ 60 QQQQQQQQQP EWYMDMAHDY TSAAPAAAAA GEEACRVQEP VQPVMLMFES DPLSPAISYA 120 SPAATEATAA PVPIEDFRKY RGVRQRPWGK YVAEIRDPKR RGSRVWLGTY DVPIDAARAY 180 DRAAFRMRGA KAILNFPNEV GTRGAHLLAA SAPASAKKRR TRQEDPDVEV IAVVSKAAEI 240 VEVPSWTSTP VSSASSPSST STFQTAEIVA STVTSAASMT ASDGAEWAFP ETPSSWSWEE 300 LLRGRPPLSP HPEF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-25 | 138 | 202 | 4 | 68 | ATERF1 |
3gcc_A | 2e-25 | 138 | 202 | 4 | 68 | ATERF1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00356.1.g00050.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020178351.1 | 2e-76 | ethylene-responsive transcription factor ERF105-like | ||||
TrEMBL | A0A3B6B4S7 | 1e-77 | A0A3B6B4S7_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446LD76 | 1e-77 | A0A446LD76_TRITD; Uncharacterized protein | ||||
STRING | Traes_2BL_859E9B1DA.2 | 6e-77 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP103 | 37 | 465 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47230.1 | 4e-23 | ethylene responsive element binding factor 5 |