PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00298.1.g00130.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 715aa    MW: 80055.5 Da    PI: 11.0914
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00298.1.g00130.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.62.1e-524125391128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrFhPtdeelvv+yL++kv++++l++  +i+evd+yk++PwdLp+k+  ++kewyfF++rd+ky++g+r+nra+ +g
  Zpz_sc00298.1.g00130.1.am.mk 412 LPPGFRFHPTDEELVVHYLCRKVARQQLPV-PIIAEVDLYKFDPWDLPEKALFGHKEWYFFTPRDRKYPNGSRPNRAAGRG 491
                                   79****************************.88***************8888899************************** PP

                           NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatg dk++  k + ++ g+kk Lvfy+g+ap+g+ktdW+mheyr+
  Zpz_sc00298.1.g00130.1.am.mk 492 YWKATGADKPIAPKgSAKAAGIKKALVFYSGKAPRGVKTDWIMHEYRV 539
                                   ************99666779**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-61408565IPR003441NAC domain
PROSITE profilePS5100560.629412565IPR003441NAC domain
PfamPF023651.4E-26413539IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    Send to blast
MSFSELQARG TGVLYKPRGR QTHESASPGR RHGTTGKDPG AFCSDKINRR QFATQPTWCD  60
DSVRPRTGIN ETGWVRSEDY RSRAKRIRSS QGRHRARTAE ATPSCSRNRT EGQKAVCRCS  120
RWLVAGVRAC VTRSFLLQII SLPWIRLPLD SRYDPSIVRR FHPQFHAIGH SPPPAEPERH  180
PAVDGSGPTT NPARRICLPR TVAARAGSTH APRGWGRQAG AGHVLNGKRR WTNLGLSAGC  240
LVARQRRTGN NPHVVPTKTQ PGTTSRQPST PRKESENIEF SRRPRAVPFV EIAEPFDPTP  300
RRRAPQVRTI STREPSRQRR PCSSAAHAAR AERGAQAARA HINGADPARL AAKETALYHP  360
AAVRNQTNRT RGRRGVLTGR GRGRFRSRVV LRRMAMAAQA SGRRDAEAEL NLPPGFRFHP  420
TDEELVVHYL CRKVARQQLP VPIIAEVDLY KFDPWDLPEK ALFGHKEWYF FTPRDRKYPN  480
GSRPNRAAGR GYWKATGADK PIAPKGSAKA AGIKKALVFY SGKAPRGVKT DWIMHEYRVA  540
DIDRAPGKKG SKKLDEWVLC RLYNKKNNWE KLKVEELHDQ VAAAHHRHKE ETMDVLADTM  600
SDSFQTHDSD IDNASGMQQN SFGDMAQGQT TMPNGMVTVK EDSDWFTDVN FDELQASYMN  660
IGQMVNPNQG QIGQMVNPNQ GQMVNPAAGQ ECHAGYLQSI GAPQMRMWQT ILPPF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-904045717174Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00298.1.g00130.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP53893761
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.14e-74NAC domain containing protein 32