PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00268.1.g00080.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | TALE | ||||||||
Protein Properties | Length: 612aa MW: 67727.2 Da PI: 5.6178 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 25.9 | 1.7e-08 | 375 | 409 | 20 | 54 |
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRak 54 + ++yp+ +e+ LA+++gLt +q+++WF N R + Zpz_sc00268.1.g00080.1.sm.mkhc 375 AFQQYPKDSEKLMLARQTGLTRSQISNWFINARVR 409 4589*****************************88 PP | |||||||
2 | BELL | 121.7 | 3.1e-39 | 269 | 340 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k akL+ +l+eVd++Yk+y++q+q+v+ssF++vag g+akpYt++Al++iSrhFrcLkdai++qi Zpz_sc00268.1.g00080.1.sm.mkhc 269 EKQELQNKMAKLMAMLDEVDRKYKHYYHQMQAVVSSFDMVAGPGAAKPYTAVALQTISRHFRCLKDAISDQI 340 689********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 6.5E-59 | 194 | 338 | IPR006563 | POX domain |
Pfam | PF07526 | 7.0E-52 | 200 | 337 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 11.353 | 353 | 413 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.9E-8 | 358 | 417 | IPR001356 | Homeobox domain |
CDD | cd00086 | 3.08E-11 | 361 | 414 | No hit | No description |
SuperFamily | SSF46689 | 1.03E-12 | 375 | 419 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.8E-18 | 376 | 419 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 4.5E-12 | 379 | 409 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 612 aa Download sequence Send to blast |
MATYYSSPGG ERDSQNMYSR DPGSASYPMS SALGNLLYLN NPTPGPYMEF SGVLQSQQNC 60 MDMPEPGHTS VMSQDSSARE SDMLGSHQGQ RTFNSVKDMK NEMLMQMMDG SQSSTADLIH 120 GDAHNGAQLE FGVLNNHSSS NAPSVQGQGL SLSLNTQILA PSLPYWSVKP DMLSPHSYHD 180 SLRVDDIRMK SMQSEASRAI RNSRYLKAAQ ELLDEVVNVW KNIKQKAQKE QVDTGRTDGK 240 ETEGEPTEGV SSNPKESAAS AAPELSTAEK QELQNKMAKL MAMLDEVDRK YKHYYHQMQA 300 VVSSFDMVAG PGAAKPYTAV ALQTISRHFR CLKDAISDQI NVIRKKLGEE ESTSGKEGKL 360 TRLRYIDQQL RQQRAFQQYP KDSEKLMLAR QTGLTRSQIS NWFINARVRL WKPMIEDMYK 420 EEIGDIEQDS NSSSDNASRS KGKVASSEDK EDLKSSRPRV CETSQLSESR SSIGTANVGG 480 APVGFQNEAN PDDSFMNLMM KDQRPNEADG GLLHNAVAHH PDENARFMAY HLAELGRYGN 540 GNVSLTLGLQ HSSSNLSAPN AQQSFPVAGD NDIYNATAPL GINISSSDYE SMNQIDQQQR 600 FEQSPLLHDF VA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00268.1.g00080.1.sm.mkhc |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004963319.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
Refseq | XP_004963320.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
Refseq | XP_004963321.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
TrEMBL | K3Z4G8 | 0.0 | K3Z4G8_SETIT; Uncharacterized protein | ||||
STRING | Si021437m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP901 | 38 | 131 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 4e-82 | BEL1-like homeodomain 7 |