PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00237.1.g00550.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family AP2
Protein Properties Length: 481aa    MW: 51733 Da    PI: 8.9038
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00237.1.g00550.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.81.7e-10230273955
                           AP2   9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Zpz_sc00237.1.g00550.1.am.mk 230 HHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 273
                                   667899****988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.06E-21212283No hitNo description
PROSITE profilePS5103217.873213281IPR001471AP2/ERF domain
SMARTSM003801.9E-27213287IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-14229283IPR016177DNA-binding domain
PfamPF008471.8E-5230273IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-14231281IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MAIAAVEGAR PVMERDLALP RRQLRLSWLC RCNWRSAEAE GPKLEDFMSV TCSNKSGSIH  60
AVQSKYNEVH DLQPLSSSYY YHNHGSGGGI DLEINVNAPP SSCHPEHRVL APQDHHYHHH  120
FLPHHGQYFL GTAANPSPSG AMPVMPMYNT NAGVGSSMSI SGIKSWLREA MYVPERSSAL  180
SLSVADMPSE PLPAPMPVAA RRPSETFGQR TSQYRGVTRF CGRARACFTH HQHGRWQARI  240
GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DISKYDVKRI CASTHLIGGD  300
AACRRSPTRP PDGPPELAAV AGADRTDAPG ASDNSDTSEG HRGTHLLHGL QYAPAMKFEA  360
GEGSGGGNWM TAAVAASRPA AGVTSMRQVN AANLGDGFVS TGNPARLRSL QSTTDTVYPA  420
ETNGIHVMRG APIESAPRSA RHGPPSHAKS TVRQMAAAQR WCHGRITSDG ALPSALPLVQ  480
R
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00237.1.g00550.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008651504.15e-74AP2-like ethylene-responsive transcription factor BBM1 isoform X1
TrEMBLR7W8P52e-90R7W8P5_AEGTA; AP2-like ethylene-responsive transcription factor AIL1
STRINGEMT184624e-91(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3168344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.14e-38AP2 family protein