PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00196.1.g00070.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 936aa MW: 102326 Da PI: 9.2635

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00196.1.g00070.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.1	2.5e-51	100	229	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 +ppGfrFhPtdeel+ +yLkkk+ +k++l evi+evd++k+ePw+L++ ++ + ++ewyfFs++d+ky+tg+r+nrat Zpz_sc00196.1.g00070.1.am.mk 100 VPPGFRFHPTDEELLLYYLKKKIGFEKFDL-EVIREVDLNKIEPWELQErcRIGSaPQNEWYFFSHKDRKYPTGSRTNRAT 179 69**************************.99**********963433332566****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++g+Wkatg+dk + + + +++g++ktLvfy+grap+g+ktdW+mhe+rle Zpz_sc00196.1.g00070.1.am.mk 180 TAGFWKATGRDKCIRT-SYRKIGMRKTLVFYRGRAPHGQKTDWIMHEFRLE 229 ***********9.8999*************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.45E-59	91	251	IPR003441	NAC domain
PROSITE profile	PS51005	57.334	100	251	IPR003441	NAC domain
Pfam	PF02365	4.7E-26	101	228	IPR003441	NAC domain
Gene3D	G3DSA:3.20.20.70	3.2E-138	572	930	IPR013785	Aldolase-type TIM barrel
CDD	cd02933	1.05E-167	572	911	No hit	No description
SuperFamily	SSF51395	1.63E-120	572	929	No hit	No description
Pfam	PF00724	7.9E-83	573	907	IPR001155	NADH:flavin oxidoreductase/NADH oxidase, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009611	Biological Process	response to wounding
GO:0055114	Biological Process	oxidation-reduction process
GO:0003677	Molecular Function	DNA binding
GO:0010181	Molecular Function	FMN binding
GO:0016491	Molecular Function	oxidoreductase activity

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence Send to blast
MAARPSYHAL ALIAIKRSVN KVRVEASGSL TGRRIWQLTE LPARARMAVP CVLRDHLLSP 60 STAAAAGVNS SRPRPPPPPR SCGSRGKGVV MAVFSSSNGV PPGFRFHPTD EELLLYYLKK 120 KIGFEKFDLE VIREVDLNKI EPWELQERCR IGSAPQNEWY FFSHKDRKYP TGSRTNRATT 180 AGFWKATGRD KCIRTSYRKI GMRKTLVFYR GRAPHGQKTD WIMHEFRLEE ADDAQGGTSE 240 DGWVVCRVFK KKCFFKIGGG GEGSASQGAD AGGHLAASPP LGGHQSVLAS HYIHPHHQYY 300 HAASSYYSQM QVPAAYSHQV QVQDLLTNHR PTADAAGYDF SGLPVEHPAA AGGLDVGSSD 360 GVAADGAQME GRDQASGAAE QQWQAIDGFG NGAGNGAVQQ MTGAMSSGQR GSEMDLWGYG 420 SANEVRELVT RTEHPDAHSD GHGLWCSASE RPAGLVRRSR LRAFAIRRPR GTVTAHRHPI 480 HADTAQKKVG RMRGDPGDLW RCVVAERGQL GRLGSWLPRP KLHGCTFLRR REVERPCSVH 540 AVSVVGRSPK PRSRMGDDRH AVAGSEQTKA IPLLTPYKMG RFQLSHRVVL APLTRQRSFG 600 CVPQPHAAVY YAQRATQGGF LIAEATGVSH AAQGYPDTPG LWTREQVEAW KPVVDAVHAK 660 GGVFFCQIWH TGRASNYEFQ PNGQAPVSST DRQVAPKESA DGLSVTSYAV PRRLRTDEIP 720 AIVDDFRIAA QNAIEAGFDG VEVHAAHGYL IDQFLKDGVN DRTDEYGGSL ANRCRLALEV 780 VAAVAAEIGA DRVGVRVSPY TDYMDATDSD PDALGAHVAR ALGELGVLYL HAVEPRMLRP 840 TERGETRHSL RPMRDAFGGT FVVAGAYARE DGSRAVADGY ADLVAYGRLF LANPDLPRRF 900 ALDAPLNKYD RKTFYTPDPV IGYTDYPFLG GDDLSK

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence Send to blast

MAARPSYHAL ALIAIKRSVN KVRVEASGSL TGRRIWQLTE LPARARMAVP CVLRDHLLSP  60
STAAAAGVNS SRPRPPPPPR SCGSRGKGVV MAVFSSSNGV PPGFRFHPTD EELLLYYLKK  120
KIGFEKFDLE VIREVDLNKI EPWELQERCR IGSAPQNEWY FFSHKDRKYP TGSRTNRATT  180
AGFWKATGRD KCIRTSYRKI GMRKTLVFYR GRAPHGQKTD WIMHEFRLEE ADDAQGGTSE  240
DGWVVCRVFK KKCFFKIGGG GEGSASQGAD AGGHLAASPP LGGHQSVLAS HYIHPHHQYY  300
HAASSYYSQM QVPAAYSHQV QVQDLLTNHR PTADAAGYDF SGLPVEHPAA AGGLDVGSSD  360
GVAADGAQME GRDQASGAAE QQWQAIDGFG NGAGNGAVQQ MTGAMSSGQR GSEMDLWGYG  420
SANEVRELVT RTEHPDAHSD GHGLWCSASE RPAGLVRRSR LRAFAIRRPR GTVTAHRHPI  480
HADTAQKKVG RMRGDPGDLW RCVVAERGQL GRLGSWLPRP KLHGCTFLRR REVERPCSVH  540
AVSVVGRSPK PRSRMGDDRH AVAGSEQTKA IPLLTPYKMG RFQLSHRVVL APLTRQRSFG  600
CVPQPHAAVY YAQRATQGGF LIAEATGVSH AAQGYPDTPG LWTREQVEAW KPVVDAVHAK  660
GGVFFCQIWH TGRASNYEFQ PNGQAPVSST DRQVAPKESA DGLSVTSYAV PRRLRTDEIP  720
AIVDDFRIAA QNAIEAGFDG VEVHAAHGYL IDQFLKDGVN DRTDEYGGSL ANRCRLALEV  780
VAAVAAEIGA DRVGVRVSPY TDYMDATDSD PDALGAHVAR ALGELGVLYL HAVEPRMLRP  840
TERGETRHSL RPMRDAFGGT FVVAGAYARE DGSRAVADGY ADLVAYGRLF LANPDLPRRF  900
ALDAPLNKYD RKTFYTPDPV IGYTDYPFLG GDDLSK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1vji_A	0.0	566	929	5	368	12-oxophytodienoate reductase (OPR1)
2q3r_A	0.0	566	929	5	368	12-oxophytodienoate reductase 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00196.1.g00070.1.am.mk

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU971542	0.0	EU971542.1 Zea mays clone 366845 NAC domain-containing protein 76 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0D9W5F8	0.0	A0A0D9W5F8_9ORYZ; Uncharacterized protein
STRING	LPERR04G10720.1	0.0	(Leersia perrieri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9297	30	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-83	NAC domain containing protein 70