PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00166.1.g00180.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 746aa    MW: 81637.1 Da    PI: 5.1402
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00166.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.51.3e-534655931128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk 79 
                                   lppGfrFhPtdeelv++yLk+k++g ++el ++i+evd+yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat+
  Zpz_sc00166.1.g00180.1.am.mk 465 LPPGFRFHPTDEELVNYYLKRKIHGLEIEL-DIIPEVDLYKCEPWELAdKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATR 544
                                   79****************************.99**************85335566888*********************** PP

                           NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +gyWk+tgkd++vl+++g+ +g+kktLv+y+grap+g++t Wvmheyrl
  Zpz_sc00166.1.g00180.1.am.mk 545 AGYWKSTGKDRRVLHHGGRRIGMKKTLVYYRGRAPQGVRTGWVMHEYRL 593
                                   ***********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF034782.1E-6315350IPR005174Domain unknown function DUF295
SuperFamilySSF1019411.57E-59458603IPR003441NAC domain
PROSITE profilePS5100557.478465656IPR003441NAC domain
PfamPF023655.3E-29466593IPR003441NAC domain
SuperFamilySSF1019411.57E-59644656IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 746 aa     Download sequence    Send to blast
MAQEQARLGW SSGLPEPEIL ESIGKGLASG HDAASFRSAC VSWRAALPFK SFAPLLLLPF  60
GPESESVTFY SVSEEEIDSK PLPDDVRGRE PCGASRGWLA LMNEAASVML LNPFTGARVE  120
LPPADEHAAA ASSGTRVSKV DGRWVLLPDD GYGNTEAVRV INLEEMRDVF IREIVLSAPP  180
YAGRECIAMA VLPNSTMVAF CRVGIDSAWT LLDTNLECSV ACIVHCQERI FAVDITGDIS  240
ICNFNTGAGA PPTATPLPSL SAPEGVCNRS YLESNGELHI VGVMVTTFHE TKTFTSNIVV  300
YKCDFLLDQT PVWSKVDDIG DMTLLVSKDF SESFGGASVS KYKRNSIYFS EALYGDPKIS  360
AIQRVLEERP GDHLIGGARG KVYSSGFVRV GNLEKSNRNP AGKGIDPDQR HVSAQREAEQ  420
ARCLSPASIS FLSATADVQL VRHQYVVRSP PPTLREGYMA ARAGLPPGFR FHPTDEELVN  480
YYLKRKIHGL EIELDIIPEV DLYKCEPWEL ADKSFLPSRD PEWYFFGPRD RKYPNGFRTN  540
RATRAGYWKS TGKDRRVLHH GGRRIGMKKT LVYYRGRAPQ GVRTGWVMHE YRLDDKDAED  600
TMPMQHTISS SPALMAIHVG VARFPLYSML NPSSSSHPSP SPSPADTYAL CRVFKKNAIC  660
TEVDDLQAAQ CNMALLEGAC QQLLPSGSQE YETPSPDVPV GSTSGGADVE DADKDDSWMQ  720
FISDDAWCSS SADGAEESAS CVALAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-484555935140Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00166.1.g00180.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7280591e-158KJ728059.1 Zea mays clone pUT6205 NAC transcription factor (NAC121) mRNA, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP542822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-105NAC domain containing protein 57