PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00096.1.g00570.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TALE
Protein Properties Length: 537aa    MW: 58370.5 Da    PI: 6.8246
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00096.1.g00570.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.41.2e-083223591954
                                   HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                      Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                                   Fe   ++yp+ +e+  LA+++gL+  qV++WF N R +
  Zpz_sc00096.1.g00570.1.am.mk 322 FEHflHPYPKDSEKLMLARQTGLSSGQVSNWFINARVR 359
                                   554459******************************88 PP
2BELL105.63.3e-34184255172
                          BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                                   erq+lq+k   L+ ll++Vd +Y++y++q+q+v+ssF+avag g+a+pYt+lAl+++SrhFr+L+dai  q+
  Zpz_sc00096.1.g00570.1.am.mk 184 ERQDLQNKVWALVALLDQVDCKYRHYHHQMQIVMSSFDAVAGAGAARPYTALALQTMSRHFRSLRDAIGAQV 255
                                   799*****************************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.7E-47117253IPR006563POX domain
PfamPF075262.8E-45124251IPR006563POX domain
PROSITE profilePS5007111.904300363IPR001356Homeobox domain
CDDcd000861.77E-11303364No hitNo description
SMARTSM003892.2E-8303367IPR001356Homeobox domain
SuperFamilySSF466899.84E-17304370IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-27306369IPR009057Homeodomain-like
PfamPF059201.0E-16320359IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    Send to blast
MSYHHYNAYS DSATGGLIPI PATIAQRVRG HAAHGEDGRD EPAPFVSTRE GQASGAEIGL  60
QTQLLMANAT SAAQSQGLFH SLGSQGVPAS LYQQYSPAGM AAASLLSPNL AAAASRNAQS  120
NIYIENSKYL KAARELLDEV VSVRHAIKRK GDKNQSKDSG ECTDAEKAGG EHEGNSTTEL  180
TASERQDLQN KVWALVALLD QVDCKYRHYH HQMQIVMSSF DAVAGAGAAR PYTALALQTM  240
SRHFRSLRDA IGAQVQSLRR SLGEKDTAAQ TGGLSRLRYI DQHLRQQRAM QQFGMMQQPQ  300
HAWRPQRGLP ESAVSVLRAW LFEHFLHPYP KDSEKLMLAR QTGLSSGQVS NWFINARVRL  360
WKPMIEEMYK EEFGAEMDSH SHSENAGNKG KDEAMSSEDH DEFQSPSSAA KHGAGHHTDT  420
FKSEATGTYA NSLNLNHQSA VGSGNGSRLL QDALAHHRHG GDARFVSYGY MAGHVGGYDG  480
GGSVSLTLGL QHCDDAGAAP AEQPGLLYGN VGDFEFVNGD EDRQRFGSSK LPHDFVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A3e-17309366158Homeobox protein Meis1
4xrs_B3e-17309366158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00096.1.g00570.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7284970.0KJ728497.1 Zea mays clone pUT6802 HB transcription factor (HB64) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985591.10.0BEL1-like homeodomain protein 7
RefseqXP_004985592.10.0BEL1-like homeodomain protein 7
RefseqXP_004985593.10.0BEL1-like homeodomain protein 7
RefseqXP_004985594.10.0BEL1-like homeodomain protein 7
TrEMBLA0A1E5W1C90.0A0A1E5W1C9_9POAL; BEL1-like homeodomain protein 7
STRINGSi034960m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90138131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-116BEL1-like homeodomain 7