PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00095.1.g00090.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 619aa    MW: 67919.7 Da    PI: 9.216
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00095.1.g00090.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1583.9e-493494741128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrF P+deelv++yL++kv++ +     v+ evd++++ePw+Lp  +k +++ewyfFs rd+kyatg r+nratksg
  Zpz_sc00095.1.g00090.1.am.mk 349 LPPGFRFFPSDEELVCHYLHNKVANAS----GVMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSG 425
                                   79**********************998....5789*************87788999************************* PP

                           NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatgkd+ +++   + ++vg++ktLvfy+grap+g kt+Wvmhe+r+
  Zpz_sc00095.1.g00090.1.am.mk 426 YWKATGKDRIIHNPkaGLAVVGMRKTLVFYRGRAPNGIKTNWVMHEFRM 474
                                   ***********998656667***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-59344493IPR003441NAC domain
PROSITE profilePS5100557.55349493IPR003441NAC domain
PfamPF023654.2E-27350474IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MGAAVQTAEH SESWGGADES ARPRAPSPSA IYSRLASLSA TSSLPSALVS WAVRGEKPGG  60
QGPGWDRIGS ERSGLDLRSW VSIHPVVRPG TEPMTVTAAK TSVWSPWMPR TWHARRTDAS  120
VSFTRQIMGA HVYHSPASLC ESLRPCERAR PGTGSGQCPA REVTGGSALT CRQPFAHPAK  180
PPFLDGIYAD DRRAAYLEPT NHCPVPLRLP PRPSAHVIAP GVPPRAGTLQ RATSMSMRAC  240
LREAGAFLSA WCRAPQILRA HSMAPVTRPT DDRKRRGECD GRARVLAFRS PRRCSALGGD  300
REIKDEQCRP RPSISPLACH AGETTYADRD RPTLVEQAKL ASHQAILTLP PGFRFFPSDE  360
ELVCHYLHNK VANASGVMVE VDLHTHEPWE LPDVAKLSTN EWYFFSFRDR KYATGLRTNR  420
ATKSGYWKAT GKDRIIHNPK AGLAVVGMRK TLVFYRGRAP NGIKTNWVMH EFRMENPHTP  480
PKEDWVLCRV FYKKKADALD YSMDNEQEIA LARSAVASGK YSSSSGPGYS PPFPSLGSTH  540
YQLPPSSDHH SSLIDFSAMA LLQHNSIFDF HAHQPLNSGS SVLAATGGSR DGGEQCGGGT  600
LMDLGLEEEH YSYNSMLQM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-4534749818172NAC domain-containing protein 19
3swm_B2e-4534749818172NAC domain-containing protein 19
3swm_C2e-4534749818172NAC domain-containing protein 19
3swm_D2e-4534749818172NAC domain-containing protein 19
3swp_A2e-4534749818172NAC domain-containing protein 19
3swp_B2e-4534749818172NAC domain-containing protein 19
3swp_C2e-4534749818172NAC domain-containing protein 19
3swp_D2e-4534749818172NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00095.1.g00090.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0609765e-99AK060976.1 Oryza sativa Japonica Group cDNA clone:006-202-E09, full insert sequence.
GenBankAK0709825e-99AK070982.1 Oryza sativa Japonica Group cDNA clone:J023075A01, full insert sequence.
GenBankCT8302505e-99CT830250.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121I23, full insert sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69738166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-71NAC domain containing protein 74