PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00077.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 305aa    MW: 33207.3 Da    PI: 7.8025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00077.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-1657105154
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                                   + y+G+r++   g+Wv+eIr+p++   + r++lg++ t+e+Aa+a++ a+++l+
  Zpz_sc00077.1.g00050.1.am.mk  57 PVYRGIRYRG--GKWVSEIREPRK---SNRIWLGTYPTPEMAAAAYDVAALALR 105
                                   68*****975..*********954...49**********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.6E-1157105IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-2158106IPR001471AP2/ERF domain
PROSITE profilePS5103217.22758116IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-1458107IPR016177DNA-binding domain
SMARTSM003807.1E-1658118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEKPWLLGAS VGSVTCIPCT LAAQMEPDPE QEVVQDAAGT PFPGSVVRRA RADTRHPVYR  60
GIRYRGGKWV SEIREPRKSN RIWLGTYPTP EMAAAAYDVA ALALRXXXXV RPGRHPRGCG  120
GCCCSRERDR LPDAPVTSDQ SPPADAGASS EQNDKAGEKE KRIVDEDDVF QVPRLLAGMA  180
EGLMMSPPRL SPTTDGAASP GWSIVAACHN VFQPVERKGF ARHTVRRGRV ARPVWSLQPS  240
TDLTFSATTT PPKKAQHGIR LFDGPTTEAQ VDLQARFTTT TSESGEKESD ADDAHRLPNS  300
DSVQH
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00077.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2365272e-59AC236527.1 Oryza minuta clone OM__Ba0059E04, complete sequence.
GenBankAC2365422e-59AC236542.1 Oryza minuta clone OM__Ba0185B12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022685545.13e-48ethylene-responsive transcription factor ERF024
TrEMBLK4AK412e-46K4AK41_SETIT; Uncharacterized protein
STRINGSi039264m3e-47(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-21ERF family protein