PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00072.1.g00300.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 144aa    MW: 15917.8 Da    PI: 6.333
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00072.1.g00300.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY44.82.4e-143794259
                                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                                  dD y+W   G   + g   p  +++C+ ++C+vkk v  s +  ++ve++Y+g+Hnh 
  Zpz_sc00072.1.g00300.1.am.mk 37 DDCYTWMNSGYQAIPGWGSPTIFFQCACENCMVKKSVTLSVDGRQIVETIYRGSHNHA 94
                                  8********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081114.5613196IPR003657WRKY domain
SuperFamilySSF1182904.97E-143396IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-123496IPR003657WRKY domain
SMARTSM007741.1E-43695IPR003657WRKY domain
PfamPF031062.1E-103793IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MDPSVPATAQ WHASSTVNTA LIQVQSHPDM SSLCSADDCY TWMNSGYQAI PGWGSPTIFF  60
QCACENCMVK KSVTLSVDGR QIVETIYRGS HNHARPSERL LRDVLTPFQP NSQHNVLPDV  120
SVDETSMRRA RKGGAKLQYS ADDD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00072.1.g00300.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021320386.12e-23probable WRKY transcription factor 58 isoform X3
TrEMBLA0A1Z5R8G01e-20A0A1Z5R8G0_SORBI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3588534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07100.21e-16WRKY DNA-binding protein 26