PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00062.1.g00200.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 433aa MW: 45534.3 Da PI: 9.6108

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00062.1.g00200.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	208	2.6e-64	93	241	2	148
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..ee 78 g+ r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+ Zpz_sc00062.1.g00200.1.sm.mkhc 93 GGARVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPaaER 171 688**********************************************************************9999 PP DUF822 79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148 ++++g+sas sp+ss+q +sp +sy++sp+sssfps+ s+++++l + +sl+p+l++ls+++s Zpz_sc00062.1.g00200.1.sm.mkhc 172 HDSIGQSASPSPCSSYQ--------PSPQASYNPSPASSSFPSSGSSSHLTLGGNnfiggvegSSLIPWLKNLSSSPS 241 *************........88999999999999999999888888887788888888*******998655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.3E-69	93	237	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence Send to blast
MPWLPLVPAP GFAERVARAS TRDAAAVGAA SGGCVHTTTT TSSSSSFLLG GSNKQNPGQG 60 RAGQGRGGTR RRTAGRIREI RRMTTAGGGG GLGGARVPTW RERENNRRRE RRRRAIAAKI 120 FAGLRAYGNY NLPKHCDNNE VLKALCNEAG WTVEPDGTTY RKGCKPPAAE RHDSIGQSAS 180 PSPCSSYQPS PQASYNPSPA SSSFPSSGSS SHLTLGGNNF IGGVEGSSLI PWLKNLSSSP 240 SFASSSKFTQ IQHLYFNGGS ISAPVTPPSS SPTRTPRFKT DWENPSVQPP WAGENYASLP 300 NSTPPSPGRQ VAPDPAWLAG FQISSAGPSS PTYNLVAPNP FGIFRETVAS SSRMCTPGQS 360 GTCSPVMGDV PAHRDVQMGD GAPDDFAFGS SSNGNNESPG LVKAWEGERI HEECVSDELE 420 LTLGSSKTRA DPS

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence Send to blast

MPWLPLVPAP GFAERVARAS TRDAAAVGAA SGGCVHTTTT TSSSSSFLLG GSNKQNPGQG  60
RAGQGRGGTR RRTAGRIREI RRMTTAGGGG GLGGARVPTW RERENNRRRE RRRRAIAAKI  120
FAGLRAYGNY NLPKHCDNNE VLKALCNEAG WTVEPDGTTY RKGCKPPAAE RHDSIGQSAS  180
PSPCSSYQPS PQASYNPSPA SSSFPSSGSS SHLTLGGNNF IGGVEGSSLI PWLKNLSSSP  240
SFASSSKFTQ IQHLYFNGGS ISAPVTPPSS SPTRTPRFKT DWENPSVQPP WAGENYASLP  300
NSTPPSPGRQ VAPDPAWLAG FQISSAGPSS PTYNLVAPNP FGIFRETVAS SSRMCTPGQS  360
GTCSPVMGDV PAHRDVQMGD GAPDDFAFGS SSNGNNESPG LVKAWEGERI HEECVSDELE  420
LTLGSSKTRA DPS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	9e-24	96	166	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	9e-24	96	166	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	9e-24	96	166	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	9e-24	96	166	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00062.1.g00200.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025813584.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	0.0	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A1E5VA88	0.0	A0A1E5VA88_9POAL; Protein BZR1-like protein 3
STRING	Pavir.J12085.1.p	0.0	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	2e-63	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]