PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00062.1.g00030.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 495aa    MW: 54364.8 Da    PI: 10.789
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00062.1.g00030.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1001.6e-3196149255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  Zpz_sc00062.1.g00030.1.sm.mk  96 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 149
                                   8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.5E-2992150IPR009057Homeodomain-like
PROSITE profilePS5129412.60192152IPR017930Myb domain
SuperFamilySSF466894.66E-1495150IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-2296151IPR006447Myb domain, plants
PfamPF002498.4E-997148IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MMRRDLPGTL YHLWYWTSTR ASPRGARKER SATTATRTTT RIGQMMTEVA QAKSSSNNSS  60
TNHNSGSNKD HDSSSKAEGS GERVPTVRQY NRSKLPRLRW TPDLHMAFVH AVERLGGQER  120
ATPKLVLQMM NVRGLSIAHV KSHLQMYRSK KLDHESGHER AAGISSVFSP MDFRMRRGDP  180
RFRDMFLQRE PGSALSSSLL QNSGFFGSRN GVSPDASRIY GLFQHRQPTM RTFDFKNYSS  240
LRNQELMFNH HAATTRVGAI TDHGPAKGLI HNMIFRKDGK PTSHLFDVRD AIASNPSAVT  300
GAANRSSNWD GSSPRPLSRT ISASSSTGFA LENHHFLSRR RCAGGSNGYH FDTNTTSSDP  360
VVTSEALGTR LEKNLEPKSP NKVIDEMHTA TGTKRPKTSM EVNGWAPDLQ LSLSPNEGAE  420
AEKAKKRKVA LSEQEVDTDK MPPLSLSLSL RGGDSGGEGS GGDARRLEAE IGSSSKAAAR  480
GLSTLDLTMS IKALE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-1897149355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-1897149355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-1897149355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-1897149355Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-1897149456Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00062.1.g00030.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812252.10.0uncharacterized protein LOC112889712
TrEMBLA0A2T7DXS00.0A0A2T7DXS0_9POAL; Uncharacterized protein
STRINGPavir.Db01175.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.19e-34G2-like family protein