PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00055.1.g00240.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 703aa    MW: 77510.7 Da    PI: 4.3861
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00055.1.g00240.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM144.84.7e-45101352128
                             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknrat 78 
                                     ppGfrF+Ptdeelv ++Lk+++++ + +    i++vd+yk++P++Lp+  ++++++++w+fFs+ d+ky++g+r++r+t
  Zpz_sc00055.1.g00240.1.am.mkhc  10 PPGFRFSPTDEELVLYFLKRRITSGRPTP--YIADVDVYKFHPSHLPErsALQTGDRQWFFFSRLDRKYPNGSRASRTT 86 
                                     8*********************9999555..6**************94357888999********************** PP

                             NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                      +gyWkatg+d+ v+s +g+ vg kktLv+++grap+ge+tdWvm ey++
  Zpz_sc00055.1.g00240.1.am.mkhc  87 GDGYWKATGRDRFVCS-GGRSVGNKKTLVYHHGRAPRGERTDWVMYEYTI 135
                                     ***************9.99*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-527158IPR003441NAC domain
PROSITE profilePS5100550.8529158IPR003441NAC domain
PfamPF023651.1E-2210135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    Send to blast
MENPPPRRWP PGFRFSPTDE ELVLYFLKRR ITSGRPTPYI ADVDVYKFHP SHLPERSALQ  60
TGDRQWFFFS RLDRKYPNGS RASRTTGDGY WKATGRDRFV CSGGRSVGNK KTLVYHHGRA  120
PRGERTDWVM YEYTILADAL PQAAEAREAY ALYKLFQKGG VGPKNGEQYG APFREEDWLD  180
DEEEHGLPSG AAAHTVTTTT NNCTAAIEEQ ADRELTVGEL EELLSEFGND QDQGEAPLDF  240
STPTSQCQGW FNDAGNKLES VDTTTVSGAL PVVENVCTDL PLGDIEELLM QISDDQQNSE  300
LLSDFPTSVP ELQCQHEDHQ VWLDADKGEE VDATGPIVNS GAVVTAGCIG SEILDGDLER  360
LLLQIACDQG MFEPISDFSA PFPHHNLNQV GIGDFVSPGN PVGTLPCIVQ GSKDFDPRIG  420
PSSQIPESNL TNVPFNAETK SAEGTSAQYS VSGSVNYNCQ DANEEFLEIN DFFDLDDVEQ  480
NVNCTANEHL ISSTNVIFEN LEYSDAPLLL PGHSDTAEMV AENQFVDFVN SGIQNQEYQY  540
TTEVRTQSQI ALNVQSHMKH NHVVLSSHTS GNMNLHMGNK PPQQNSNTSK SWFNAAFSAL  600
LDSVPSSPAI AAEIESTVIS ETLQRISSFR SQQAANEENT VIYKAIQRIS SFKSQHAASE  660
GPITPVIKAT RSVRLIFVSL LVLLAAIMWT FITGKGLWKC SST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-451013516140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00055.1.g00240.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002462597.10.0NAC domain-containing protein 82 isoform X2
TrEMBLA0A1E5UTD40.0A0A1E5UTD4_9POAL; NAC domain-containing protein 16
STRINGPavir.J04800.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91282840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.19e-65NAC domain containing protein 17