PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00053.1.g00120.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 185aa MW: 20387 Da PI: 9.5151 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43 | 9.9e-14 | 56 | 99 | 3 | 46 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 e +r rrk++NRe+ArrsR+RK++ ++ L v +L+ +Nk+L Zpz_sc00053.1.g00120.1.am.mk 56 ENRRKRRKESNRESARRSRLRKQQHLDGLNSQVNQLTDQNKQLG 99 5689*************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.7E-11 | 51 | 98 | No hit | No description |
SMART | SM00338 | 1.3E-12 | 54 | 118 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.749 | 56 | 98 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.4E-11 | 56 | 98 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-11 | 58 | 107 | No hit | No description |
CDD | cd14702 | 9.12E-17 | 59 | 107 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 61 | 76 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MLLLALSEHL LLGGSSVIGS SITRLVQSFS VVFLHCLGTR SSRSSEDDVN LQAQMENRRK 60 RRKESNRESA RRSRLRKQQH LDGLNSQVNQ LTDQNKQLGV ALRVTSQNLV AVQAQNSVLQ 120 TQKLELESRL GSLADFLLCL NPGTTASTGS AANSAVMNDS LMTTTSGACT WSQPVDLYHH 180 HHQCF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 58 | 63 | RKRRKE |
2 | 70 | 76 | RRSRLRK |
3 | 70 | 77 | RRSRLRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00053.1.g00120.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003577967.1 | 8e-54 | bZIP transcription factor 44 | ||||
TrEMBL | A0A0A9GYA3 | 3e-56 | A0A0A9GYA3_ARUDO; Uncharacterized protein | ||||
STRING | Pavir.Ba02250.1.p | 1e-55 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3740 | 32 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18160.1 | 4e-10 | basic leucine-zipper 2 |