PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00021.1.g00610.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 926aa    MW: 98991 Da    PI: 7.4355
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00021.1.g00610.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2491.5e-15762809152
                           AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52 
                                   ++ +GV  ++ +gr++AeIr+ +     r +r++lg+f+t+e Aa+a++aa+ +
  Zpz_sc00021.1.g00610.1.am.mk 762 PKLRGVLKRP-WGRYAAEIRHpV-----RkARVWLGTFDTPEAAARAYDAAAAR 809
                                   688****999.**********44.....55********************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.80.10.101.5E-5242294IPR032675Leucine-rich repeat domain, L domain-like
PfamPF082631.9E-74284IPR013210Leucine-rich repeat-containing N-terminal, plant-type
SuperFamilySSF520584.42E-5783422IPR032675Leucine-rich repeat domain, L domain-like
PfamPF138555.4E-788145IPR001611Leucine-rich repeat
PfamPF138552.4E-6158217IPR001611Leucine-rich repeat
PfamPF135161.2252269IPR001611Leucine-rich repeat
Gene3DG3DSA:3.80.10.101.7E-41295425IPR032675Leucine-rich repeat domain, L domain-like
PfamPF005600.92352371IPR001611Leucine-rich repeat
Gene3DG3DSA:3.80.10.101.7E-41498541IPR032675Leucine-rich repeat domain, L domain-like
CDDcd000189.01E-14762797No hitNo description
PfamPF008479.2E-10762808IPR001471AP2/ERF domain
SMARTSM003807.9E-25763827IPR001471AP2/ERF domain
PROSITE profilePS5103220.165763821IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-17763822IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.0E-26764822IPR001471AP2/ERF domain
PRINTSPR003672.8E-7764775IPR001471AP2/ERF domain
PRINTSPR003672.8E-7786802IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 926 aa     Download sequence    Send to blast
MGKPGWGGSG RAGRSVVLLK EGKAEAACVL GLFCSPAIQG HSDKQVLLQL KKFLQAQNPL  60
NRGAYDGWSE SDAVPCRWAG VGCDSAGRVR SLDLSSSNIS GPSFSNFSLL PRLAHLDLSA  120
NSINGPLQDD LRRCERLRYL NLTKNFFSGV LDVSSLTKLH ILDVSQNRFQ ERIDMNFPVI  180
CGNLTYLSVS GNNLSGDMDG LFDGCPRLRY VDISWNSFSG SVLLGIGSIT GLEVLVLGSN  240
RFDADIPLEL KNCSRLKYID ISDNGFGGEV QPVIGELKSL KSIVLRENNY TGGIDSSGIL  300
QLPNITMLDL GYNSFSGELP SNFSRTASIT VIMLPENDFS GPIPPDYGLF VRLQILDVSY  360
NSLSGRIPPE IGTLKSLLLL MLDGNQLSGQ IPKEIGNCTS LLWLNIAENL LSGEIPPEIA  420
SMGSNPDPTF MENRRNQGEP LEPITNNCEG VSQWVPASYP EFDFVNLLMK TPKNCRAEWI  480
RLASGYHTVP MSSYDPAFGY VVLSGNLLSG EIPVTIGTMS DLGLLLLDRN QLSGNLPPEI  540
DLRNIGAAAD AAASGVEGVA EWWKRRGGGH AGQARAEGGT WVRGQCGGGA KAEATRGARM  600
DSRGGVELDD SRLCSAEVSR QPGHVGSQQR RPLPANQPAI RRRAQPNPGR MMRAHAPTDF  660
LNRPQVPAAP PAHGAAPAPR KNIASPSGQR SDNVTFTHLA VCNTSARSAE LQRKHVHQPI  720
DPAQLPSYRS SSTAGTFVNR PMAPRRPTSP AGSGSGAAGE PPKLRGVLKR PWGRYAAEIR  780
HPVRKARVWL GTFDTPEAAA RAYDAAAARR LRGPRAATNY PDAALPTPAT SASGSSTTEL  840
LDESSCSALA APPSLDLSLG LPTTPACMYL DQEKAAPALV HFLPLKGEEA RSDGSGSSTS  900
SSSVVDEPAL SLGLDLNLTW PIDAVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5xjx_A9e-446555927476LRR receptor-like serine/threonine-protein kinase ERL1
5xjx_B9e-446555927476LRR receptor-like serine/threonine-protein kinase ERL1
5xjx_E9e-446555927476LRR receptor-like serine/threonine-protein kinase ERL1
5xjx_G9e-446555927476LRR receptor-like serine/threonine-protein kinase ERL1
5xjx_I9e-446555927476LRR receptor-like serine/threonine-protein kinase ERL1
5xjx_K9e-446555927476LRR receptor-like serine/threonine-protein kinase ERL1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00021.1.g00610.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015648807.10.0probable LRR receptor-like serine/threonine-protein kinase At1g74360
TrEMBLA0A0E0E3I20.0A0A0E0E3I2_9ORYZ; Uncharacterized protein
STRINGONIVA09G08120.10.0(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP212822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.15e-14ERF domain protein 11