PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zpz_sc00021.1.g00110.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 217aa MW: 24371.7 Da PI: 9.2983 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 35.6 | 1.8e-11 | 85 | 127 | 10 | 52 |
RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + + ++++kdAA eLg+ + LK C +G++RWP ++sl Zpz_sc00021.1.g00110.1.am.mk 85 VLAVLHMHLKDAADELGITMCHLKFVCHSNGLHRWPGKTVRSL 127 55678*******************************9999886 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 11.16 | 52 | 147 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.6E-9 | 84 | 127 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 217 aa Download sequence Send to blast |
MPKSLQRASR LRCAASSTAQ YESNGYEDSH REDRDCGPVL FKRQETLHQS NQPDSLAPST 60 KKKLSDLVVV TMPRRRGPSP PWSDVLAVLH MHLKDAADEL GITMCHLKFV CHSNGLHRWP 120 GKTVRSLNAR LDRLIREAAM EKASPGALPR WADHRRRTLS KIAQEARTVI RELDNIYERI 180 RNPVPELPAP EPEVDGDGTM NLIDSVGVSS GTRENNI |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Zpz_sc00021.1.g00110.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP18443 | 5 | 9 |