PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00007.1.g01190.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | AP2 | ||||||||
Protein Properties | Length: 589aa MW: 63557.6 Da PI: 6.628 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.7 | 5.9e-13 | 274 | 330 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ +g rk + g ++t+++Aa+a++ a++k++g Zpz_sc00007.1.g01190.1.sm.mk 274 SQYRGVTRHRWTGRYEAHLWDnSCKrDGqTRKGRQ-GGYDTEDKAARAYDLAALKYWG 330 78*******************98887775446655.77***99*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 3.07E-14 | 274 | 340 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 9.3E-10 | 274 | 330 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.74E-18 | 274 | 338 | No hit | No description |
PROSITE profile | PS51032 | 17.82 | 275 | 338 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.5E-12 | 275 | 339 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.8E-20 | 275 | 344 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-6 | 276 | 287 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 9.532 | 327 | 403 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.0E-6 | 362 | 409 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.71E-5 | 376 | 404 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.8E-6 | 378 | 403 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-6 | 385 | 405 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 589 aa Download sequence Send to blast |
MASSSSWLGF SLSSHMTMEA PSAAETVPAH HPPAPASASA TMSSSPDNTT PCNVLFHPPA 60 HMAAPSPGYY YVGGAYGDGT TTAGVYYSHP HLPVMPVKSD GSLCNMEGMM ASSSPKLEDF 120 LGGGNDTAAY YSHQDVGQEE DDASKSYQYH QIVPYNFQPL TEAEMLQEAA APMEEAMAVA 180 KNFLVTNYGA CYSNGEMQPR SLSMMSPGSQ SSGCVSAAPQ HQMTAVAAAA ASAHQGRSNG 240 GGEQGVGKKR GTGKGGHKQP VHRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCKRD 300 GQTRKGRQGG YDTEDKAARA YDLAALKYWG PATSINFPLE HHREELEEMK TMTRLEYIAH 360 LRRRSSGFSR GASIYRGTQE EAAEAYDVAA IKFRGLNAVT NFDITRYDVE KIMESNVLLP 420 GKEARKVKAI EPANGVSATH NCGRELNPTE DAGTEWRMVL HASHQEEAVP RTEAPDDLHK 480 SVTADDPRPS LHGVVGLDVE CEAPQHDMHG SGRIAGGLSF SDSSSREGVP AETQRLGLAM 540 LYNKHPNVTV SLVTVSPWTQ MPAPPTASHV LRPPTAVSHL PVFAAWADA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CAC[AG]N[AT]TNCCNANG-3'. Required for the initiation and growth of ovules integumenta, and for the development of female gametophyte. Plays a critical role in the development of gynoecium marginal tissues (e.g. stigma, style and septa), and in the fusion of carpels and of medial ridges leading to ovule primordia. Also involved in organs initiation and development, including floral organs. Maintains the meristematic competence of cells and consequently sustains expression of cell cycle regulators during organogenesis, thus controlling the final size of each organ by controlling their cell number. Regulates INO autoinduction and expression pattern. As ANT promotes petal cell identity and mediates down-regulation of AG in flower whorl 2, it functions as a class A homeotic gene. {ECO:0000269|PubMed:10528263, ECO:0000269|PubMed:10639184, ECO:0000269|PubMed:10948255, ECO:0000269|PubMed:11041883, ECO:0000269|PubMed:12183381, ECO:0000269|PubMed:12271029, ECO:0000269|PubMed:12655002, ECO:0000269|PubMed:8742706, ECO:0000269|PubMed:8742707, ECO:0000269|PubMed:9001406, ECO:0000269|PubMed:9093862, ECO:0000269|PubMed:9118807}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00007.1.g01190.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021318295.1 | 0.0 | AP2-like ethylene-responsive transcription factor ANT isoform X2 | ||||
Swissprot | Q38914 | 1e-101 | ANT_ARATH; AP2-like ethylene-responsive transcription factor ANT | ||||
TrEMBL | A0A0A9LT82 | 0.0 | A0A0A9LT82_ARUDO; Uncharacterized protein | ||||
STRING | Si034722m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP948 | 38 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 4e-77 | AP2 family protein |