PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc09952.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 71aa MW: 8340.35 Da PI: 10.0588 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.7 | 3e-10 | 52 | 71 | 2 | 21 |
--SS-EEEEEEE--TT-SS- CS WRKY 2 dDgynWrKYGqKevkgsefp 21 +Dgy+WrKYGqK+++g+++p Zmw_sc09952.1.g00010.1.sm.mk 52 HDGYEWRKYGQKMIRGNTYP 71 7****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.2E-9 | 36 | 71 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.62E-8 | 45 | 71 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 10.613 | 53 | 71 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.4E-6 | 53 | 71 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 71 aa Download sequence Send to blast |
MAKRDDYKTS SSGCSNGTHK RLLQDISGYA QEHAKKKVRV STRMEYTYAP YHDGYEWRKY 60 GQKMIRGNTY P |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002456546.1 | 5e-37 | probable WRKY transcription factor 32 | ||||
Refseq | XP_021311159.1 | 5e-37 | probable WRKY transcription factor 32 | ||||
Refseq | XP_021311160.1 | 5e-37 | probable WRKY transcription factor 32 | ||||
Refseq | XP_021311161.1 | 5e-37 | probable WRKY transcription factor 32 | ||||
Refseq | XP_021311162.1 | 5e-37 | probable WRKY transcription factor 32 | ||||
TrEMBL | C5XN99 | 1e-35 | C5XN99_SORBI; Uncharacterized protein | ||||
STRING | Sb03g038170.1 | 2e-36 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11814 | 31 | 39 |