PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc09340.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | B3 | ||||||||
Protein Properties | Length: 219aa MW: 25147.2 Da PI: 8.1984 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.6 | 2.9e-10 | 84 | 133 | 29 | 80 |
-..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 29 kkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 +k +++tl+ e es rsW+v + +l+ GWk F+++n+LkegD + Zmw_sc09340.1.g00010.1.sm.mk 84 EKSCTITLKTEMESIRSWKVHG--LAYEHVNYLGHGWKIFCQDNRLKEGDGF 133 455666666666777*******..9999999*******************66 PP | |||||||
2 | B3 | 50.5 | 3.7e-16 | 136 | 209 | 25 | 99 |
TT---..--SEEEEEE..TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 25 ehggkkeesktltled..esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++g++ ++ t+tl++ s +sW+v ++ + k+g+y l++ W +F+++n+LkegD+++Fk+++ + l++k f++ Zmw_sc09340.1.g00010.1.sm.mk 136 AIGLQGPC--TITLKTsiHSAKSWQVDVS-KEKKGSYQLGQDWCKFCQDNRLKEGDICTFKYMSAACSVLTIKTFDA 209 55666445..55555532667*******4.666678***************************99888899999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 5.5E-7 | 37 | 80 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.41E-7 | 37 | 131 | No hit | No description |
SuperFamily | SSF101936 | 3.92E-7 | 82 | 133 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 3.2E-8 | 84 | 133 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 7.006 | 88 | 131 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 9.2E-4 | 117 | 210 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 2.75E-13 | 133 | 212 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.4E-14 | 134 | 212 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.86E-12 | 137 | 208 | No hit | No description |
Pfam | PF02362 | 4.4E-14 | 138 | 209 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.011 | 144 | 210 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MPLLFTDTQL YNTFAISQLI KPAMIDMQDA SWKYLRMIPA KFVKHYVTDE YMNCQMAAVI 60 LDPLGKFWRF KVEKDRSGIC IGFEKSCTIT LKTEMESIRS WKVHGLAYEH VNYLGHGWKI 120 FCQDNRLKEG DGFFIAIGLQ GPCTITLKTS IHSAKSWQVD VSKEKKGSYQ LGQDWCKFCQ 180 DNRLKEGDIC TFKYMSAACS VLTIKTFDAS CCFTELVTN |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP425 | 35 | 187 |