PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc08836.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25151.7 Da PI: 10.6348 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.1 | 5.2e-19 | 151 | 199 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ + Zmw_sc08836.1.g00010.1.am.mk 151 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 199 59*******9.**********8.....334*********************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 8.67E-32 | 151 | 210 | No hit | No description |
SMART | SM00380 | 9.7E-39 | 152 | 215 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.4E-12 | 152 | 196 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.6E-33 | 152 | 209 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.55E-20 | 152 | 210 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.878 | 152 | 209 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 153 | 164 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 175 | 191 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MDLILGSLHG LTAQDGQPPP RPACTFHGRA APAFTAKDPS EQLQQQKVPS AKNSLTHVSE 60 WSRAVKLRSW FGSLRARLQP SSNIINEVAK GVGEGVYYQC PGSRGWLCHP LQFTDSAADP 120 THLLPIFVPP VFPPHHTKIP EQRISMVQSK KKFRGVRQRH WGSWVSEIRH PLLKRRVWLG 180 TFETAEEAAR AYDEAAVLMS GRNAKTNFPV PRSATGELAP VPAARDS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-15 | 151 | 217 | 4 | 70 | ATERF1 |
3gcc_A | 1e-15 | 151 | 217 | 4 | 70 | ATERF1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1418 | 35 | 118 |