PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc08745.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 377aa MW: 40542.7 Da PI: 10.7349

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc08745.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.8e-10	300	359	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR++A +s +RK +++ eLe++v +L+ e ++L+ ++e+ + e+ +lk+++ Zmw_sc08745.1.g00020.1.sm.mk 300 PKRVKRILANRVSAAKSKERKVKYMGELERRVHVLQMETSTLAAKVEREQRESVALKTQN 359 5999********************************************999999999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.4E-13	297	361	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.473	299	362	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.8E-9	301	359	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-9	301	358	No hit	No description
SuperFamily	SSF57959	5.91E-10	301	357	No hit	No description
CDD	cd14703	9.28E-21	302	351	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence Send to blast
MDDGRGDPAR RRLLSPPAGG QGQGLRLPPR APATDLYSQF QRRFSHSLFL PPPMVPRFPS 60 AASGSGSAFS YYQGTPGLSQ PPFFSVDHQR PFIYAGQAAG AVTRSPLSLG AEQGPSSVLP 120 PRGAGHRRSR SDFLFGLSRP NMSVPVPPAV EAAALDSVFG SYRVMGTLGS VVNGAEERHD 180 HARFPRLWIP ANSSDNKAEN LAAAGVRGAG PSNPRHCRSL SVDSFMGNLN FETVGQESPN 240 LPLTSPAAGN GAGLSRTGSG SFGGPPAPTD LVIPNGEFSE ADRKKIMAND HLAEIAQTDP 300 KRVKRILANR VSAAKSKERK VKYMGELERR VHVLQMETST LAAKVEREQR ESVALKTQNN 360 EMRIRVQALE QHAQLKD

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence Send to blast

MDDGRGDPAR RRLLSPPAGG QGQGLRLPPR APATDLYSQF QRRFSHSLFL PPPMVPRFPS  60
AASGSGSAFS YYQGTPGLSQ PPFFSVDHQR PFIYAGQAAG AVTRSPLSLG AEQGPSSVLP  120
PRGAGHRRSR SDFLFGLSRP NMSVPVPPAV EAAALDSVFG SYRVMGTLGS VVNGAEERHD  180
HARFPRLWIP ANSSDNKAEN LAAAGVRGAG PSNPRHCRSL SVDSFMGNLN FETVGQESPN  240
LPLTSPAAGN GAGLSRTGSG SFGGPPAPTD LVIPNGEFSE ADRKKIMAND HLAEIAQTDP  300
KRVKRILANR VSAAKSKERK VKYMGELERR VHVLQMETST LAAKVEREQR ESVALKTQNN  360
EMRIRVQALE QHAQLKD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025803483.1	1e-119	transcription factor RF2a-like
TrEMBL	A0A3L6QQY6	1e-121	A0A3L6QQY6_PANMI; Uncharacterized protein
STRING	Pavir.J03608.1.p	1e-116	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14870	18	20