PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc08148.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family FAR1
Protein Properties Length: 217aa    MW: 23964.8 Da    PI: 6.1008
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc08148.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR164.14e-2086171189
                          FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevt 79 
                                   +fYneYA+++GF  r+ +s++sk ++    + +v ++eg  ++++ +  + +++r+r++ r gC+a+++v +e +++w+v+
  Zmw_sc08148.1.g00010.1.sm.mk  86 EFYNEYARRLGFPFRVGRSRRSKGTE----EVLVMKREGMYKKKQPSsdDATRKRERVSMRDGCNAMMEVVRE-SDHWVVS 161
                                   6*********************6666....55666677665555544335689999***************99.9****** PP

                          FAR1  80 kleleHnHel 89 
                                   kle+ HnH l
  Zmw_sc08148.1.g00010.1.sm.mk 162 KLEKAHNHGL 171
                                   ********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.5E-1786171IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MIMEGARSEG DELIADYVDC LMSLDTSARS HQNDSIVLGD SIVEGAPSLS VGGAAEPEVM  60
KDFALGDDPN EPVLGMVFES DEAAKEFYNE YARRLGFPFR VGRSRRSKGT EEVLVMKREG  120
MYKKKQPSSD DATRKRERVS MRDGCNAMME VVRESDHWVV SKLEKAHNHG LGTCTKEADS  180
NPGHSGHKSR HSFHKIAGSS LNIRNSPPIM AATDKDF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193510.12e-89protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020193511.12e-89protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020193512.12e-89protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A453JX237e-90A0A453JX23_AEGTS; Uncharacterized protein
STRINGTraes_5DS_61EE28B2A.29e-89(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1832967