PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc07655.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 442aa MW: 48130.2 Da PI: 5.2882 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 37 | 7.7e-12 | 295 | 320 | 1 | 26 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+r+rWt++LHerFv+ v+qLGG+++ Zmw_sc07655.1.g00020.1.sm.mkhc 295 KTRIRWTQDLHERFVDSVNQLGGADR 320 68*********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.2E-9 | 294 | 324 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 7.8E-19 | 341 | 386 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence Send to blast |
MISTGGTVDG SFDLDFSFLF LIKEIPKTQG VKYSIDICGY FDWLPEHKGF PIQFRDSVIT 60 AMNAKKIRLH DHHYGSQMCD PQLFQATTAA LSFHPGFVSS APQQDGGVGG WPPEEYSPTP 120 RSVLATQGGC VGSDTAAFFA AEDLLGMARF DCALPPLAAL KTAPFRRSQE ADQLYRSVDP 180 PLLRDDSVRT YYVPPQQREA AKAPPALKLP LQQHQQEQVQ GLFGNAFDAG LLLGGEPKNH 240 SFSPHVAAST LLPAIDAPSM QIPGENALSM SCTMGAPATH TSKVITLPGQ GAPSKTRIRW 300 TQDLHERFVD SVNQLGGADR KHEKRAAGND VLNLDPNTGE QITEALRVQL DVQRRLHEQL 360 AMQRNLQLKI EEQGKRLQKM FEEQLKASKS VLEPREQLQG AGAALDEVIG VGDEEDDACD 420 DVQLLSVASS GCNDAGFPSK IS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025822779.1 | 1e-178 | probable transcription factor KAN2 | ||||
Refseq | XP_025822780.1 | 1e-178 | probable transcription factor KAN2 | ||||
TrEMBL | A0A2T7D1E3 | 1e-177 | A0A2T7D1E3_9POAL; Uncharacterized protein | ||||
STRING | Si022099m | 1e-178 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6933 | 37 | 51 |