PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc07514.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 361aa MW: 39085.9 Da PI: 6.5726

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07514.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.8	2.1e-53	13	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 lppGfrFhPtdeel+++yL +k+++ ++ + +++ e+d++k+ePwdLp+++k +ekewyfF+ +d+ky+tg r+nrat+ Zmw_sc07514.1.g00060.1.sm.mkhc 13 LPPGFRFHPTDEELITQYLGRKAADPRFAA-RAVGEADLNKCEPWDLPSRAKWGEKEWYFFCVKDRKYPTGLRTNRATE 90 79***********************999.88***********99999********************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 sgyWkatgkd+e+++ ++ lvg+kktLvfy+grapkg +t Wvmheyrle Zmw_sc07514.1.g00060.1.sm.mkhc 91 SGYWKATGKDREIFR-GKVLVGMKKTLVFYTGRAPKGGNTGWVMHEYRLE 139 ***********.99****************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.71E-62	8	174	IPR003441	NAC domain
PROSITE profile	PS51005	57.406	13	174	IPR003441	NAC domain
Pfam	PF02365	2.5E-28	14	138	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
MELDVHHHQD MDLPPGFRFH PTDEELITQY LGRKAADPRF AARAVGEADL NKCEPWDLPS 60 RAKWGEKEWY FFCVKDRKYP TGLRTNRATE SGYWKATGKD REIFRGKVLV GMKKTLVFYT 120 GRAPKGGNTG WVMHEYRLEE KRVTNGGAGS GNVFLSSTAA TSKDEWVLCR VFKKNIERPT 180 VAGGKRSGSS SFMETADACP SISVADELAA ACALPPLMDV STVSGGVHMS LSAAAAIELL 240 PPPAHVTCFS NALESPFLNP PFIAPSATAP ASAAAHGAAV AADHFAVASP SPFLQMQYEG 300 AAGGLVQELL LHEGGGWYSK HGERERLSGA SQDTGVTSEV NPAETSSSRE HMNHEASLWD 360 Y

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

MELDVHHHQD MDLPPGFRFH PTDEELITQY LGRKAADPRF AARAVGEADL NKCEPWDLPS  60
RAKWGEKEWY FFCVKDRKYP TGLRTNRATE SGYWKATGKD REIFRGKVLV GMKKTLVFYT  120
GRAPKGGNTG WVMHEYRLEE KRVTNGGAGS GNVFLSSTAA TSKDEWVLCR VFKKNIERPT  180
VAGGKRSGSS SFMETADACP SISVADELAA ACALPPLMDV STVSGGVHMS LSAAAAIELL  240
PPPAHVTCFS NALESPFLNP PFIAPSATAP ASAAAHGAAV AADHFAVASP SPFLQMQYEG  300
AAGGLVQELL LHEGGGWYSK HGERERLSGA SQDTGVTSEV NPAETSSSRE HMNHEASLWD  360
Y

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-56	11	175	15	166	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-56	11	175	15	166	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-56	11	175	15	166	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-56	11	175	15	166	NO APICAL MERISTEM PROTEIN
3swm_A	1e-56	11	175	18	169	NAC domain-containing protein 19
3swm_B	1e-56	11	175	18	169	NAC domain-containing protein 19
3swm_C	1e-56	11	175	18	169	NAC domain-containing protein 19
3swm_D	1e-56	11	175	18	169	NAC domain-containing protein 19
3swp_A	1e-56	11	175	18	169	NAC domain-containing protein 19
3swp_B	1e-56	11	175	18	169	NAC domain-containing protein 19
3swp_C	1e-56	11	175	18	169	NAC domain-containing protein 19
3swp_D	1e-56	11	175	18	169	NAC domain-containing protein 19
4dul_A	1e-56	11	175	15	166	NAC domain-containing protein 19
4dul_B	1e-56	11	175	15	166	NAC domain-containing protein 19
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004952889.1	1e-165	NAC domain-containing protein 92
Refseq	XP_022679460.1	1e-165	NAC domain-containing protein 92
TrEMBL	K3YTH5	1e-163	K3YTH5_SETIT; Uncharacterized protein
STRING	Si017567m	1e-164	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2730	37	87