PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc07514.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 69aa MW: 7806.85 Da PI: 8.5011

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07514.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.3e-19	15	69	1	46
TSSS-HHHHHHHHHHHHHTTTT..........-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..........tWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEd++l+ +++q+G g W++Ia +++ +Rt++++k++w++ Zmw_sc07514.1.g00010.1.am.mk 15 KGPWTPEEDQKLLAYIEQHGHGcwrslpakagAWSAIATHLP-KRTDNEIKNYWNT 69 79**************************************.*********95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	19.513	10	69	IPR017930	Myb domain
SuperFamily	SSF46689	1.22E-14	12	67	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	7.7E-14	13	46	IPR009057	Homeodomain-like
SMART	SM00717	1.4E-11	14	69	IPR001005	SANT/Myb domain
Pfam	PF00249	1.3E-17	15	69	IPR001005	SANT/Myb domain
CDD	cd00167	5.97E-14	17	69	No hit	No description
Gene3D	G3DSA:1.10.10.60	7.7E-10	47	69	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 69 aa Download sequence Send to blast
MGRSPCCEKE AGLKKGPWTP EEDQKLLAYI EQHGHGCWRS LPAKAGAWSA IATHLPKRTD 60 NEIKNYWNT

Functional Description ? help Back to Top
Source	Description
UniProt	Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269\|PubMed:18805951, ECO:0000269\|PubMed:21070410, ECO:0000269\|PubMed:23709630, ECO:0000269\|PubMed:24169067}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025817649.1	5e-36	transcription factor MYB106-like
Swissprot	Q9LE63	1e-31	MY106_ARATH; Transcription factor MYB106
TrEMBL	A0A1E5VC58	1e-36	A0A1E5VC58_9POAL; Uncharacterized protein
STRING	OMERI02G20550.1	4e-37	(Oryza meridionalis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP229	38	296