PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc07298.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 553aa MW: 60351.2 Da PI: 10.005

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07298.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117	7.8e-37	233	287	5	59
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 l+cprC s+ntkfCy+nny+++qPr+fCk C+ryWt+GGalrnvPvG+grrkn+ Zmw_sc07298.1.g00040.1.am.mk 233 PLPCPRCRSRNTKFCYFNNYNVNQPRHFCKDCHRYWTAGGALRNVPVGAGRRKNR 287 679**************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	28.733	234	288	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.0E-30	234	287	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	236	272	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-19	243	287	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence Send to blast
MLRRMIENAD HVERIPPRSD DAPPSLRFSA TAKKPHGQVH SLPLGLGIVL DDRRAAEEKK 60 PQLAAYRVRS LSSRGPTHRL SFGSSATTTH PSIPPPPPPA LLSLGRLLQP PAAFLAWKVR 120 MLSHVEMAPA AGGFKLFGKV ITQCAAPAPP PEEPASRAAA FLRERADPDE SDQPTVKREA 180 CVDHDFEKQQ QQQDQGVGGG GTESGESKAA HQRSRQQDTA EAPAAAAASS APPLPCPRCR 240 SRNTKFCYFN NYNVNQPRHF CKDCHRYWTA GGALRNVPVG AGRRKNRPLG PVVAAVPGHH 300 HQLQHHRAAG FVLGFPGNPT SPTSPVYADR WPVCPDRRRV VRVDNAIDKK RLATWTWAHA 360 HFRDWRPRRF PPSRKGAAAI AEKRRGVNIP NRQVARVISS FAPATVEAES RQPSALVVGS 420 CAASAGTEGT FWCCTLGSLL DTGLQDAKDT EQAARTVTWV GSAACDFMSA AIMSGNAAAA 480 VLPLRTERER ESWGQWHGIS SATTQKDVRN YAVENEDMWI GSHRSGRDME AWITIRCAQA 540 TAPDVDGWMS LFC

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence Send to blast

MLRRMIENAD HVERIPPRSD DAPPSLRFSA TAKKPHGQVH SLPLGLGIVL DDRRAAEEKK  60
PQLAAYRVRS LSSRGPTHRL SFGSSATTTH PSIPPPPPPA LLSLGRLLQP PAAFLAWKVR  120
MLSHVEMAPA AGGFKLFGKV ITQCAAPAPP PEEPASRAAA FLRERADPDE SDQPTVKREA  180
CVDHDFEKQQ QQQDQGVGGG GTESGESKAA HQRSRQQDTA EAPAAAAASS APPLPCPRCR  240
SRNTKFCYFN NYNVNQPRHF CKDCHRYWTA GGALRNVPVG AGRRKNRPLG PVVAAVPGHH  300
HQLQHHRAAG FVLGFPGNPT SPTSPVYADR WPVCPDRRRV VRVDNAIDKK RLATWTWAHA  360
HFRDWRPRRF PPSRKGAAAI AEKRRGVNIP NRQVARVISS FAPATVEAES RQPSALVVGS  420
CAASAGTEGT FWCCTLGSLL DTGLQDAKDT EQAARTVTWV GSAACDFMSA AIMSGNAAAA  480
VLPLRTERER ESWGQWHGIS SATTQKDVRN YAVENEDMWI GSHRSGRDME AWITIRCAQA  540
TAPDVDGWMS LFC

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6495	28	51