PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc07173.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | TCP | ||||||||
Protein Properties | Length: 193aa MW: 20339.1 Da PI: 10.5254 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.4 | 6.5e-35 | 41 | 123 | 3 | 92 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssa 82 +k + ++++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++t+eWLl+qa+p+i ++tg+++s+a +c ss s+ Zmw_sc07173.1.g00030.1.sm.mk 41 KKPSGSKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTVEWLLRQAEPSILAATGSGTSPAvFSC---SSAPST 118 5666789********************************************************999995444...222222 PP TCP 83 snsssgkaak 92 s+s ++ Zmw_sc07173.1.g00030.1.sm.mk 119 SSS-----SR 123 211.....11 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 1.5E-30 | 45 | 134 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 26.73 | 46 | 100 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MASREHAAAT FHQVYQPTPA PMSLAALAPT DAAVAMAPAR KKPSGSKDRH SKVNGRGRRV 60 RMPIVCAARV FQLTRELGLK SDGQTVEWLL RQAEPSILAA TGSGTSPAVF SCSSAPSTSS 120 SSRSLLLGKR PRQDVDEAPP PLWAAMQARP VGVAWGLSTP AQEQAYASAA QGHCLNLLSV 180 LSGTTKPAEE ESR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004976294.1 | 7e-66 | transcription factor PCF1 | ||||
Swissprot | Q9FMX2 | 2e-37 | TCP7_ARATH; Transcription factor TCP7 | ||||
TrEMBL | A0A0A9DEW8 | 3e-83 | A0A0A9DEW8_ARUDO; Uncharacterized protein | ||||
STRING | Traes_2BL_4B6057E06.1 | 1e-69 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1941 | 33 | 100 |