PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06873.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 374aa    MW: 39896.6 Da    PI: 9.4924
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06873.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.83.2e-20238299263
                                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     +elk e+rkq+NRe+ArrsR RK+ae+eeL++ v++L++eN +Lk+e+++l++ ++kl+ e+
  Zmw_sc06873.1.g00030.1.sm.mkhc 238 RELKHEKRKQSNRESARRSRMRKQAETEELATQVESLTQENVSLKSEISRLTNSSEKLRLEN 299
                                     89********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.4E-27192IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.3E-17232296No hitNo description
PfamPF001702.1E-18237299IPR004827Basic-leucine zipper domain
SMARTSM003384.5E-21237301IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.875239302IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-11241295No hitNo description
CDDcd147021.63E-22242289No hitNo description
PROSITE patternPS000360244259IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MAHDDAVATQ KTGKAASPPK DQPAPYPYPD WSNMQAYYGP GVLPPTYFAP AIAPGHAPPY  60
MWGPQPIMPP PFGTPYTPMY PHNGAYPHPL VPTISNPLSV EPAKSANSKD KSFSKTLNEI  120
NGAAASAGSG NSKRTMSSSE DYSAEGSSVN EQKVSKTSRK RTSDDGPGAK MEGVIASNHT  180
LGHTSILPNH CFPAPIIKPN ATNVANLREM GAAISPSPAA IISAHTGTAT DLSIKDKREL  240
KHEKRKQSNR ESARRSRMRK QAETEELATQ VESLTQENVS LKSEISRLTN SSEKLRLENS  300
ALMVKLKDPA APKPAESAPD KAATPGMAPR DAENFLSTID GSNTAGAAQR TEHGEPKLRQ  360
LFDSQPATNV TAVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253260RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025807251.10.0common plant regulatory factor 1-like isoform X1
TrEMBLA0A0A9PLG00.0A0A0A9PLG0_ARUDO; GBF1
STRINGPavir.J01411.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888